Protein: | gi|108708671, gi... |
Organism: | Oryza sativa Japonica Group |
Length: | 748 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108708671, gi....
Description | E-value | Query Range |
Subject Range |
|
562.0 | [0..6] | [744..12] |
Region A: Residues: [1-61] |
1 11 21 31 41 51 | | | | | | 1 MECNKDEALR AKEIAERKFE SKDLQGAKKF ALKAQALFPG LEGIVQMITT LDLYLASEVL 60 61 I |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [62-151] |
1 11 21 31 41 51 | | | | | | 1 SGEKDWYSIL SVESSADDET LKKQYRKLVL QLHPDKNKSV GAEGAFKMVQ EAWTVLSDKT 60 61 KRALYDQKRK LMVLKRNTSQ TNKASAAPGA |
Detection Method: | ![]() |
Confidence: | 19.221849 |
Match: | 1xblA |
Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB):![]() |
Region A: Residues: [152-398] |
1 11 21 31 41 51 | | | | | | 1 SNGFYNFAAN AAASKVTRGN KQKAGPATSS VRQRPPPPPP PPRQAPAPPP AKPPTFWTSC 60 61 NKCKMNYEYL KVYLNHNLLC PTCREPFLAQ EVPMPPTESV HAVHDPNISG ANQNTNGSRN 120 121 FQWGPFSRTA GAASATASSA AAAQAANVVH HTYEKVRRER EEAQAAARRE EALRRKYNPP 180 181 KRQANISENL NLGTGGNSSK KMRTMGNDIG IGSSSILSGS GANYFGVPGG NISFSTNSGA 240 241 HHFQGVN |
Detection Method: | ![]() |
Confidence: | 35.69897 |
Match: | 1nltA |
Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB):![]() |
Term | Confidence | Notes |
binding | 0.036672061154828 | bayes_pls_golite062009 |
Region A: Residues: [399-493] |
1 11 21 31 41 51 | | | | | | 1 GGFSWKPRPP TRISLVKTFT QFDVRGILME KAKSDLKDKL KEMQTKRSQV AANGKKNKKN 60 61 MFKESGGDDE SLASDDSTAR QAAHVDPEDN ASVNS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [494-620] |
1 11 21 31 41 51 | | | | | | 1 TDADDENDDP LSYNVPDPDF HDFDKDRTEE CFQSDQIWAT YDDEDGMPRY YAFIQKVLSL 60 61 EPFQLKISFL TSRTNSEFGS LNWVSSGFTK TCGDFRICRY ETCDILNMFS HQIKWEKGPR 120 121 GVIKIYP |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [621-748] |
1 11 21 31 41 51 | | | | | | 1 QKGNIWAVYR NWSPDWDEDT PDKVLHAYDV VEVLDEYDED LGISVIPLVK VAGFRTVFQR 60 61 NQDLNAIKKI PKEEMFRFSH EVPFYRMSGE EAPNVPKDSY ELDPAAISKE LLQEITETVE 120 121 SSKATSEC |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.