| Protein: | gi|108708671, gi... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 748 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108708671, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
562.0 | [0..6] | [744..12] |
|
Region A: Residues: [1-61] |
1 11 21 31 41 51
| | | | | |
1 MECNKDEALR AKEIAERKFE SKDLQGAKKF ALKAQALFPG LEGIVQMITT LDLYLASEVL 60
61 I
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [62-151] |
1 11 21 31 41 51
| | | | | |
1 SGEKDWYSIL SVESSADDET LKKQYRKLVL QLHPDKNKSV GAEGAFKMVQ EAWTVLSDKT 60
61 KRALYDQKRK LMVLKRNTSQ TNKASAAPGA
|
| Detection Method: | |
| Confidence: | 19.221849 |
| Match: | 1xblA |
| Description: | NMR STRUCTURE OF THE J-DOMAIN (RESIDUES 2-76) IN THE ESCHERICHIA COLI N-TERMINAL FRAGMENT (RESIDUES 2-108) OF THE MOLECULAR CHAPERONE DNAJ, 20 STRUCTURES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [152-398] |
1 11 21 31 41 51
| | | | | |
1 SNGFYNFAAN AAASKVTRGN KQKAGPATSS VRQRPPPPPP PPRQAPAPPP AKPPTFWTSC 60
61 NKCKMNYEYL KVYLNHNLLC PTCREPFLAQ EVPMPPTESV HAVHDPNISG ANQNTNGSRN 120
121 FQWGPFSRTA GAASATASSA AAAQAANVVH HTYEKVRRER EEAQAAARRE EALRRKYNPP 180
181 KRQANISENL NLGTGGNSSK KMRTMGNDIG IGSSSILSGS GANYFGVPGG NISFSTNSGA 240
241 HHFQGVN
|
| Detection Method: | |
| Confidence: | 35.69897 |
| Match: | 1nltA |
| Description: | The crystal structure of Hsp40 Ydj1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.036672061154828 | bayes_pls_golite062009 |
|
Region A: Residues: [399-493] |
1 11 21 31 41 51
| | | | | |
1 GGFSWKPRPP TRISLVKTFT QFDVRGILME KAKSDLKDKL KEMQTKRSQV AANGKKNKKN 60
61 MFKESGGDDE SLASDDSTAR QAAHVDPEDN ASVNS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [494-620] |
1 11 21 31 41 51
| | | | | |
1 TDADDENDDP LSYNVPDPDF HDFDKDRTEE CFQSDQIWAT YDDEDGMPRY YAFIQKVLSL 60
61 EPFQLKISFL TSRTNSEFGS LNWVSSGFTK TCGDFRICRY ETCDILNMFS HQIKWEKGPR 120
121 GVIKIYP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [621-748] |
1 11 21 31 41 51
| | | | | |
1 QKGNIWAVYR NWSPDWDEDT PDKVLHAYDV VEVLDEYDED LGISVIPLVK VAGFRTVFQR 60
61 NQDLNAIKKI PKEEMFRFSH EVPFYRMSGE EAPNVPKDSY ELDPAAISKE LLQEITETVE 120
121 SSKATSEC
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
