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View Structure Prediction Details

Protein: KAD_STRAW
Organism: Streptomyces avermitilis MA-4680
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KAD_STRAW.

Description E-value Query
Range
Subject
Range
KAD_CARHZ - Adenylate kinase OS=Carboxydothermus hydrogenoformans (strain ATCC BAA-161 / DSM 6008 / Z-2901) GN=a...
226.0 [0..1] [215..1]
gi|169347079, gi... - gi|169347079|ref|ZP_02866021.1| adenylate kinase [Clostridium perfringens C str. JGS1495], gi|169296...
gi|182626945, gi... - gi|182626945|ref|ZP_02954678.1| adenylate kinase [Clostridium perfringens D str. JGS1721], gi|177907...
KAD_CLOP1 - Adenylate kinase OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / N...
gi|170663256, gi... - gi|170663256|gb|EDT15939.1| adenylate kinase [Clostridium perfringens E str. JGS1987], gi|168205213|...
KAD_CLOPS - Adenylate kinase OS=Clostridium perfringens (strain SM101 / Type A) GN=adk PE=3 SV=1
gi|168211884, gi... - gi|170710173|gb|EDT22355.1| adenylate kinase [Clostridium perfringens B str. ATCC 3626], gi|16821188...
gi|168215197, gi... - gi|170713401|gb|EDT25583.1| adenylate kinase [Clostridium perfringens CPE str. F4969], gi|168215197|...
gi|168216652, gi... - gi|182381130|gb|EDT78609.1| adenylate kinase [Clostridium perfringens NCTC 8239], gi|168216652|ref|Z...
219.0 [0..1] [215..1]
KAD_STRCO - Adenylate kinase OS=Streptomyces coelicolor GN=adk PE=3 SV=3
KAD_STRCO - Adenylate kinase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=adk PE=3 SV=3
218.0 [0..1] [215..1]
KAD_CLOPE - Adenylate kinase OS=Clostridium perfringens GN=adk PE=3 SV=1
KAD_CLOPE - Adenylate kinase OS=Clostridium perfringens (strain 13 / Type A) GN=adk PE=3 SV=1
217.0 [0..1] [215..3]
gi|54288772 - gi|54288772|gb|AAV31762.1| adenylate kinase [Geobacillus stearothermophilus]
217.0 [0..1] [214..1]
gi|73949913 - gi|73949913|ref|XP_864020.1| PREDICTED: similar to adenylate kinase 2 isoform b isoform 2 [Canis fam...
216.0 [0..1] [218..18]
KAD_METTP - Adenylate kinase OS=Methanosaeta thermophila (strain DSM 6194 / JCM 14653 / NBRC 101360 / PT) GN=adk...
215.0 [0..1] [215..1]
KAD_BACHD - Adenylate kinase OS=Bacillus halodurans GN=adk PE=3 SV=2
KAD_BACHD - Adenylate kinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-...
215.0 [0..1] [214..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIVLVGPPG AGKGTQAAFL AKNLGIPHIS TGDLFRANIS QQTELGKLAK SYMDEGNLVP  60
   61 DEVTIAMAKD RMEQPDAVNG FLLDGFPRNV KQAEALDEML KSEGMKLDAV LDLEVPEDEV 120
  121 VKRIAGRRIC RNDSAHVFHV SYKPPKQEGV CDVCGGELYQ RDDDSEETVR RRLEVYHTQT 180
  181 EPIIDYYRAQ GLVVTISALG PVEEVTQRAM DALKREDASK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 1zinA
Description: ADENYLATE KINASE WITH BOUND AP5A
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleobase, nucleoside, nucleotide kinase activity 5.63633783771436 bayes_pls_golite062009
nucleotide kinase activity 4.87013305162694 bayes_pls_golite062009
hydrogen ion transporting ATP synthase activity, rotational mechanism 4.82340609517643 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 4.71956130169341 bayes_pls_golite062009
substrate-specific transporter activity 4.0949233879946 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 3.99447661719154 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 3.87925071606336 bayes_pls_golite062009
adenylate kinase activity 3.67594732794865 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 3.42302963379604 bayes_pls_golite062009
ion transmembrane transporter activity 3.18231927518784 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 3.06199686145935 bayes_pls_golite062009
cation transmembrane transporter activity 2.98215729643952 bayes_pls_golite062009
binding 2.64537357529343 bayes_pls_golite062009
nucleic acid binding 2.11222585187695 bayes_pls_golite062009
DNA binding 1.7904783386531 bayes_pls_golite062009
transcription regulator activity 1.68903321260301 bayes_pls_golite062009
ribonucleotide binding 1.53142082854758 bayes_pls_golite062009
purine nucleotide binding 1.52938239070386 bayes_pls_golite062009
purine ribonucleotide binding 1.52887308780164 bayes_pls_golite062009
nucleotide binding 1.52746968836881 bayes_pls_golite062009
ATP binding 1.23942044024113 bayes_pls_golite062009
protein binding 1.22129154759482 bayes_pls_golite062009
adenyl ribonucleotide binding 1.21044170258803 bayes_pls_golite062009
adenyl nucleotide binding 1.19481945569892 bayes_pls_golite062009
kinase activity 1.11120928120082 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
guanylate kinase activity 0.98934362137863 bayes_pls_golite062009
proton-transporting ATPase activity, rotational mechanism 0.938652092720669 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.908046791062776 bayes_pls_golite062009
structural constituent of ribosome 0.738234102557832 bayes_pls_golite062009
motor activity 0.68122766055454 bayes_pls_golite062009
cation-transporting ATPase activity 0.635625372639205 bayes_pls_golite062009
transcription factor activity 0.603758349693077 bayes_pls_golite062009
CTP synthase activity 0.554689818807922 bayes_pls_golite062009
microtubule motor activity 0.48522137429998 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.421921195209539 bayes_pls_golite062009
protein kinase activity 0.351308564667977 bayes_pls_golite062009
translation regulator activity 0.29096092258568 bayes_pls_golite062009
translation factor activity, nucleic acid binding 0.274994961137851 bayes_pls_golite062009
formate-tetrahydrofolate ligase activity 0.21533099279384 bayes_pls_golite062009
transferase activity 0.175269600441384 bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of ions 0.17485591642323 bayes_pls_golite062009
helicase activity 0.0775311459068899 bayes_pls_golite062009
structural molecule activity 0.0558641287316701 bayes_pls_golite062009

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