YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260264, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	120 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260264, gi|....

Description	E-value	Query Range	Subject Range
gi\|89084762, gi\|... - gi\|89100496\|ref\|ZP_01173357.1\| Dihydroneopterin aldolase [Bacillus sp. NRRL B-14911], gi\|89084762\|gb...	6.0E-40	[1..119]	[1..119]
gi\|29893884, gi\|... - gi\|30018344\|ref\|NP_829975.1\| dihydroneopterin aldolase [Bacillus cereus ATCC 14579], gi\|29893884\|gb\|... gi\|218233912, gi... - gi\|218233912\|ref\|YP_002364923.1\| dihydroneopterin aldolase [Bacillus cereus B4264], gi\|218161869\|gb\|... gi\|206732498, gi... - gi\|206972596\|ref\|ZP_03233539.1\| dihydroneopterin aldolase [Bacillus cereus AH1134], gi\|206732498\|gb\|...	5.0E-38	[1..120]	[1..120]
gi\|152973921, gi... - gi\|89202207\|ref\|ZP_01180935.1\| Dihydroneopterin aldolase family:Dihydroneopterin aldolase [Bacillus ...	5.0E-38	[1..119]	[1..119]
gi\|163938081, gi... - gi\|89207174\|ref\|ZP_01185720.1\| Dihydroneopterin aldolase family:Dihydroneopterin aldolase [Bacillus ...	7.0E-38	[1..120]	[1..120]
gi\|16799334 - gi\|16799334\|ref\|NP_469602.1\| hypothetical protein lin0257 [Listeria innocua Clip11262] gi\|16412686, gi\|... - pir\|\|AB1465 dihydroneopterin aldolase homolog folA [imported] - Listeria innocua (strain Clip11262),...	7.0E-38	[1..119]	[1..119]
gi\|221312210 - gi\|221312210\|ref\|ZP_03594015.1\| dihydroneopterin aldolase [Bacillus subtilis subsp. subtilis str. NC... FOLB_BACSU - Dihydroneopterin aldolase OS=Bacillus subtilis (strain 168) GN=folB PE=3 SV=1 gi\|221321406 - gi\|221321406\|ref\|ZP_03602700.1\| dihydroneopterin aldolase [Bacillus subtilis subsp. subtilis str. SM... FOLB_BACSU - Dihydroneopterin aldolase OS=Bacillus subtilis GN=folB PE=3 SV=1 gi\|221317143 - gi\|221317143\|ref\|ZP_03598437.1\| dihydroneopterin aldolase [Bacillus subtilis subsp. subtilis str. JH...	8.0E-38	[1..119]	[1..119]
gi\|153172871, gi... - gi\|254829642\|ref\|ZP_05234329.1\| hypothetical protein LmonocytogeFSL_14365 [Listeria monocytogenes FS... gi\|16409590, gi\|... - pir\|\|AB1103 dihydroneopterin aldolase homolog folA [imported] - Listeria monocytogenes (strain EGD-e... gi\|16802271 - gi\|16802271\|ref\|NP_463756.1\| hypothetical protein lmo0225 [Listeria monocytogenes EGD-e] gi\|224503818 - gi\|224503818\|ref\|ZP_03672125.1\| hypothetical protein LmonFR_15186 [Listeria monocytogenes FSL R2-561...	1.0E-37	[1..119]	[1..119]
gi\|228905870, gi... - gi\|228905870\|ref\|ZP_04069768.1\| Dihydroneopterin aldolase [Bacillus thuringiensis IBL 200], gi\|22885... gi\|75762252, gi\|... - gi\|75762252\|ref\|ZP_00742140.1\| Dihydroneopterin aldolase [Bacillus thuringiensis serovar israelensis... gi\|218542084, gi... - gi\|218895209\|ref\|YP_002443620.1\| dihydroneopterin aldolase [Bacillus cereus G9842], gi\|218542084\|gb\|...	2.0E-37	[1..120]	[1..120]
gi\|46906458, gi\|... - gi\|46906458\|ref\|YP_012847.1\| dihydroneopterin aldolase [Listeria monocytogenes str. 4b F2365], gi\|46... gi\|255522547 - gi\|255522547\|ref\|ZP_05389784.1\| dihydroneopterin aldolase [Listeria monocytogenes FSL J1-175] gi\|254992590 - gi\|254992590\|ref\|ZP_05274780.1\| dihydroneopterin aldolase [Listeria monocytogenes FSL J2-064] gi\|254880679 - gi\|254880679\|ref\|ZP_05253389.1\| dihydroneopterin aldolase [Listeria monocytogenes FSL J2-071] gi\|254854613 - gi\|254854613\|ref\|ZP_05243961.1\| dihydroneopterin aldolase [Listeria monocytogenes FSL R2-503] gi\|133728402, gi... - gi\|254874014\|ref\|ZP_05246724.1\| dihydroneopterin aldolase [Listeria monocytogenes FSL N1-017], gi\|15... gi\|254826417 - gi\|254826417\|ref\|ZP_05231418.1\| dihydroneopterin aldolase [Listeria monocytogenes FSL J1-194] gi\|225875316, gi... - gi\|226222854\|ref\|YP_002756961.1\| dihydroneopterin aldolase [Listeria monocytogenes Clip81459], gi\|22...	2.0E-37	[1..119]	[1..119]
gi\|88946459, gi\|... - gi\|88946459\|ref\|ZP_01149537.1\| Dihydroneopterin aldolase family:Dihydroneopterin aldolase [Desulfoto...	4.0E-37	[2..119]	[12..129]

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Predicted Domain #1

Region A:
Residues: [1-120]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKIYIHDME FYGYHGVFPE ENKLGQRFKV DLTVELDLKR AGESDDLEHS VNYGELFELC  60
   61 RKVVEDRTYK LVESIAENIA TDILKQYESI SRCTIKVIKP DPPIPGHYRA VAVEITRERP 120
  121

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.522879
Match:	1dhnA
Description:	1.65 ANGSTROM RESOLUTION STRUCTURE OF 7,8-DIHYDRONEOPTERIN ALDOLASE FROM STAPHYLOCOCCUS AUREUS
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
GTP cyclohydrolase I activity	4.32142445441644	bayes_pls_golite062009
cyclohydrolase activity	4.12134839958676	bayes_pls_golite062009
GTP cyclohydrolase activity	3.76376266092452	bayes_pls_golite062009
catalytic activity	2.57832156213163	bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	2.13367928146634	bayes_pls_golite062009
dihydroneopterin aldolase activity	2.05627605013559	bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.46072575729571	bayes_pls_golite062009
6-pyruvoyltetrahydropterin synthase activity	0.11818000438771	bayes_pls_golite062009
lyase activity	0.0597333135477298	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: