YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263095, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	326 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263095, gi|....

Description	E-value	Query Range	Subject Range
gi\|37681066, gi\|... - gi\|37681066\|ref\|NP_935675.1\| glutaminase [Vibrio vulnificus YJ016], gi\|37199816\|dbj\|BAC95646.1\| glut...	0.0	[7..326]	[3..311]
GLSA_YERPN - Glutaminase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=glsA PE=3 SV=1 gi\|149290657, gi... - gi\|149367043\|ref\|ZP_01889076.1\| putative glutaminase [Yersinia pestis CA88-4125], gi\|149290657\|gb\|ED... gi\|145597872, gi... - gi\|145597872\|ref\|YP_001161948.1\| glutaminase [Yersinia pestis Pestoides F], gi\|145209568\|gb\|ABP38975... gi\|89102074, gi\|... - gi\|89102074\|ref\|ZP_01174739.1\| COG2066: Glutaminase [Yersinia pestis biovar Orientalis str. IP275], ... gi\|108806312, gi... - gi\|108806312\|ref\|YP_650228.1\| glutaminase [Yersinia pestis Antiqua], gi\|108778225\|gb\|ABG12283.1\| L-g... gi\|165923158, gi... - gi\|165924958\|ref\|ZP_02220790.1\| glutaminase [Yersinia pestis biovar Orientalis str. F1991016], gi\|16... gi\|162353396, gi... - gi\|77633210\|ref\|ZP_00795354.1\| COG2066: Glutaminase [Yersinia pestis Angola], gi\|162420581\|ref\|YP_00... gi\|45438099, gi\|... - gi\|45443231\|ref\|NP_994770.1\| glutaminase [Yersinia pestis biovar Microtus str. 91001], gi\|45438099\|g... gi\|22127212, gi\|... - gi\|22127212\|ref\|NP_670635.1\| glutaminase [Yersinia pestis KIM], gi\|21960280\|gb\|AAM86886.1\|AE013935_3... gi\|229837645, gi... - gi\|229837645\|ref\|ZP_04457807.1\| putative glutaminase [Yersinia pestis Pestoides A], gi\|229704333\|gb\|... gi\|218928120, gi... - gi\|218928120\|ref\|YP_002345995.1\| glutaminase [Yersinia pestis CO92], gi\|16121252\|ref\|NP_404565.1\| gl... gi\|229697235, gi... - gi\|229840869\|ref\|ZP_04461028.1\| putative glutaminase [Yersinia pestis biovar Orientalis str. PEXU2],... gi\|229690880, gi... - gi\|229842570\|ref\|ZP_04462725.1\| putative glutaminase [Yersinia pestis biovar Orientalis str. India 1... gi\|165990877, gi... - gi\|166010391\|ref\|ZP_02231289.1\| glutaminase [Yersinia pestis biovar Antiqua str. E1979001], gi\|16599... gi\|166212862, gi... - gi\|166212862\|ref\|ZP_02238897.1\| glutaminase [Yersinia pestis biovar Antiqua str. B42003004], gi\|1662... gi\|167399886, gi... - gi\|167399886\|ref\|ZP_02305404.1\| glutaminase [Yersinia pestis biovar Antiqua str. UG05-0454], gi\|1670... gi\|167422002, gi... - gi\|167422002\|ref\|ZP_02313755.1\| glutaminase [Yersinia pestis biovar Orientalis str. MG05-1020], gi\|1... gi\|167426699, gi... - gi\|167426699\|ref\|ZP_02318452.1\| glutaminase [Yersinia pestis biovar Mediaevalis str. K1973002], gi\|1... GLSA1_YERPE - Glutaminase 1 OS=Yersinia pestis GN=glsA1 PE=3 SV=1	0.0	[9..326]	[2..308]
gi\|186699681, gi... - gi\|186896655\|ref\|YP_001873767.1\| glutaminase [Yersinia pseudotuberculosis PB1/+], gi\|186699681\|gb\|AC... gi\|170023072, gi... - gi\|170023072\|ref\|YP_001719577.1\| glutaminase [Yersinia pseudotuberculosis YPIII], gi\|169749606\|gb\|AC... Q666M7\|Q666M7_YERPS - Putative glutaminase - Yersinia pseudotuberculosis gi\|51597531, gi\|... - gi\|51597531\|ref\|YP_071722.1\| glutaminase [Yersinia pseudotuberculosis IP 32953], gi\|51590813\|emb\|CAH...	0.0	[9..326]	[2..308]
GLSA_VIBVU - Glutaminase OS=Vibrio vulnificus (strain CMCP6) GN=glsA PE=3 SV=1 GLSA_VIBVU - Glutaminase OS=Vibrio vulnificus GN=glsA PE=3 SV=1 GLSA_VIBVY - Glutaminase OS=Vibrio vulnificus (strain YJ016) GN=glsA PE=3 SV=2	0.0	[10..326]	[1..306]
gi\|117672578, gi... - gi\|77630197\|ref\|ZP_00792783.1\| COG2066: Glutaminase [Yersinia pseudotuberculosis IP 31758], gi\|15395...	0.0	[9..326]	[2..308]
gi\|91228694, gi\|... - gi\|91228694\|ref\|ZP_01262608.1\| glutaminase [Vibrio alginolyticus 12G01], gi\|91187765\|gb\|EAS74083.1\| ...	0.0	[10..326]	[1..306]
gi\|254230232, gi... - gi\|254230232\|ref\|ZP_04923624.1\| glutaminase superfamily [Vibrio sp. Ex25], gi\|194538709\|ref\|YP_00207...	0.0	[10..326]	[1..306]
GLSA_VIBF1 - Glutaminase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glsA PE=3 SV=1	0.0	[10..326]	[1..306]
gi\|153823171, gi... - gi\|153823171\|ref\|ZP_01975838.1\| glutaminase family protein [Vibrio cholerae B33], gi\|126519297\|gb\|EA... gi\|9654879, gi\|1... - gi\|9654879\|gb\|AAF93627.1\| glutaminase family protein [Vibrio cholerae O1 biovar El Tor str. N16961],... gi\|11278903 - pir\|\|F82320 glutaminase family protein VC0454 [imported] - Vibrio cholerae (strain N16961 serogroup ... gi\|153224228, gi... - gi\|153224228\|ref\|ZP_01954311.1\| glutaminase family protein [Vibrio cholerae MAK 757], gi\|124117754\|g... gi\|227080664, gi... - gi\|227080664\|ref\|YP_002809215.1\| glutaminase family protein [Vibrio cholerae M66-2], gi\|227008552\|gb... gi\|121629145, gi... - gi\|121728589\|ref\|ZP_01681610.1\| glutaminase family protein [Vibrio cholerae V52], gi\|121629145\|gb\|EA... gi\|126510311, gi... - gi\|153819166\|ref\|ZP_01971833.1\| glutaminase family protein [Vibrio cholerae NCTC 8457], gi\|126510311... gi\|125618184, gi... - gi\|254850685\|ref\|ZP_05240035.1\| glutaminase family protein [Vibrio cholerae MO10], gi\|254846390\|gb\|E...	0.0	[3..326]	[7..316]
GLSA_VIBPA - Glutaminase OS=Vibrio parahaemolyticus GN=glsA PE=3 SV=1 GLSA_VIBPA - Glutaminase OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) GN=glsA PE=3 SV=1	0.0	[10..326]	[1..306]

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Predicted Domain #1

Region A:
Residues: [1-326]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKDSSVQVE GQEKVCLDQW VAHYRTYAAK GRSASYIPAL GEINVSQLGI CIVKPDGTMI  60
   61 KSGDWEIPFT LQSISKVIGF IAACLSRGIS YVLERVDVEP TGDAFNSIIR LEIHKPGKPF 120
  121 NPMINAGAIT IASLLPGTSV QEKLESIYVL IEKMIEKRPA INEIVFQSEW ETAHRNRALA 180
  181 YYLKENGFLE SDVEETLEVY LKQCSIEINT EDIALIGLIL AHDGYHPIRK EQVLPKEVAR 240
  241 LTKALMLTCG MYNASGKFAA FIGLPAKSGV SGGIMTLVPS KSRKDLSFQD GCGIGIYGPA 300
  301 IDEYGNSLPG IMLLEHIAKE WDLSIF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	122.0
Match:	1mkiA
Description:	Probable glutaminase YbgJ
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
glutaminase activity	3.05260098857235	bayes_pls_golite062009
catalytic activity	1.85492008367309	bayes_pls_golite062009
hydrolase activity	1.71405735425066	bayes_pls_golite062009
peptidase activity	1.14979151805038	bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides	0.993155046655368	bayes_pls_golite062009
binding	0.561769858928222	bayes_pls_golite062009
serine hydrolase activity	0.0949097045108613	bayes_pls_golite062009
serine-type peptidase activity	0.0789968984744888	bayes_pls_golite062009
exopeptidase activity	0.0768852505919514	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: