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View Structure Prediction Details

Protein: gi|30259623, gi|...
Organism: Bacillus anthracis str. Ames
Length: 179 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259623, gi|....

Description E-value Query
Range		 Subject
Range
gi|5353561 - gi|5353561|gb|AAD42179.1| superoxide dismutase/HCV major epitope fusion protein [synthetic construct...
 2.0E-50 [23..173] [1..154]
gi|194672519, gi... - gi|76632745|ref|XP_584414.2| PREDICTED: similar to Superoxide dismutase [Bos taurus], gi|194672519|r...
 1.0E-47 [9..173] [23..191]
gi|218564 - gi|218564|dbj|BAA14373.1| unnamed protein product [Schizosaccharomyces pombe]
 2.0E-46 [25..179] [2..159]
gi|74229679 - gi|74229679|gb|ABA00454.1| chloroplast Cu/ZnSOD [Gossypium hirsutum]
 5.0E-46 [6..174] [83..253]
SODC_CALJA - Superoxide dismutase [Cu-Zn] OS=Callithrix jacchus GN=SOD1 PE=2 SV=3
 1.0E-45 [26..173] [4..154]
SODC_MACMU - Superoxide dismutase [Cu-Zn] OS=Macaca mulatta GN=SOD1 PE=2 SV=3
SODC_MACFA - Superoxide dismutase [Cu-Zn] OS=Macaca fascicularis GN=SOD1 PE=2 SV=3
gi|23503516 - gi|23503516|dbj|BAC20348.1| Cu,Zn-superoxide dismutase [Macaca fuscata]
SODC_MACFU - Superoxide dismutase [Cu-Zn] OS=Macaca fuscata fuscata GN=SOD1 PE=2 SV=3
 2.0E-45 [26..173] [4..154]
SODC_SAPAP - Superoxide dismutase [Cu-Zn] OS=Sapajus apella GN=SOD1 PE=2 SV=3
 4.0E-45 [26..173] [4..154]
gi|125586252, gi... - gi|125586252|gb|EAZ26916.1| hypothetical protein OsJ_10843 [Oryza sativa Japonica Group], gi|1087081...
 5.0E-45 [26..172] [121..269]
SODC_SHEEP - (P09670) Superoxide dismutase [Cu-Zn] (EC 1.15.1.1)
 7.0E-45 [25..173] [2..151]

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Predicted Domain #1
Region A:
Residues: [1-179] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRLFFSCC LLFLMAGCDQ GKPKEIDVKL HNASGDEVGT AKVTQQTSGV KITIKGEGFA  60
   61 PGPHGLHVHE IGECKAPRFE SAGNHFNPDD KKHGLLNPKG AENGDLPNVI ADGSGKIKAE 120
  121 IDAPHITLEE GKTTIHRKDG ASIIITENAD DGMTQPTGKS GDRIACGVIV KKASDMKKK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.045757
Match: 1cbjA
Description: Cu,Zn superoxide dismutase, SOD
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein phosphatase 2B binding 13.5719110466797 bayes_pls_golite062009
superoxide dismutase activity 12.1093323949609 bayes_pls_golite062009
oxidoreductase activity, acting on superoxide radicals as acceptor 12.1093323949609 bayes_pls_golite062009
chaperone binding 5.11696266714142 bayes_pls_golite062009
superoxide dismutase copper chaperone activity 4.57456075148703 bayes_pls_golite062009
copper ion binding 4.51765925795625 bayes_pls_golite062009
protein phosphatase binding 3.26481550276071 bayes_pls_golite062009
phosphatase binding 3.1414149853516 bayes_pls_golite062009
transition metal ion binding 2.451533032488 bayes_pls_golite062009
binding 2.28211284921339 bayes_pls_golite062009
enzyme binding 1.82618630359051 bayes_pls_golite062009
metal ion binding 1.79413011653575 bayes_pls_golite062009
cation binding 1.79413011653575 bayes_pls_golite062009
ion binding 1.78699219376941 bayes_pls_golite062009
catalytic activity 1.09233965765942 bayes_pls_golite062009
protein binding 0.916153188966515 bayes_pls_golite062009
metallochaperone activity 0.515959593535099 bayes_pls_golite062009
copper chaperone activity 0.412497194733789 bayes_pls_golite062009
ion transmembrane transporter activity 0.32642292951469 bayes_pls_golite062009
cation transmembrane transporter activity 0.262312399748454 bayes_pls_golite062009
zinc ion binding 0.25600715352161 bayes_pls_golite062009
antioxidant activity 0.240491838042064 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle