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Protein Overview: gi|125586252, gi...

General Information:
Name(s) found: gi|125586252 [NCBI NR]
gi|108708142 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|125586252|gb|EAZ26916.1| hypothetical protein OsJ_10843 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108708142|gb|ABF95937.1| Superoxide dismutase 1, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 270 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVQVISDELR LSPLTGRALN TGQRRIYPVV PNYLDTGSSA KELGVTERRQ SVTLGARALN  60
   61 VGWWLQLQAA SLTTNTTAHR WREGNLPEAP DSKPAGVASP PPSSSSSSPR GSPEITLTMV 120
  121 KAVVVLGSSE IVKGTIHFVQ EGDGPTTVTG SVSGLKPGLH GFHIHALGDT TNGCMSTGPH 180
  181 YNPAGKEHGA PEDETRHAGD LGNVTAGEDG VANIHVVDSQ IPLTGPNSII GRAVVVHADP 240
  241 DDLGKGGHEL SKTTGNAGGR VACGIIGLQG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] deduced N/A No confident structure predictions are available.
    2 View Details [108..270] PSI-BLAST 52.154902 Cu,Zn superoxide dismutase, SOD


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle