| Protein: | gi|46913675, gi|... |
| Organism: | Photobacterium profundum SS9 |
| Length: | 144 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46913675, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
121.0 | [0..1] | [141..1] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MSTSFDRQSS LGWLINVVAN KLKNDFDTEL KKHGLTIALW PTLMCLWEEE GVTQREIAIK 60
61 SKVESSTTTR TIDKLERLNL VERRDDPQSR RSFRIYLTDE GRALQSTLIH IPVDINESML 120
121 SSLDSEEQEK MLSLLKKLVN NIDV
|
| Detection Method: |  |
| Confidence: | 22.30103 |
| Match: | 2a61A |
| Description: | The crystal structure of transcriptional regulator Tm0710 from Thermotoga maritima |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.98990675336286 | bayes_pls_golite062009 |
| DNA binding | 3.4273272886116 | bayes_pls_golite062009 |
| nucleic acid binding | 3.38054693035398 | bayes_pls_golite062009 |
| transcription factor activity | 2.80110428028438 | bayes_pls_golite062009 |
| binding | 2.18911933843505 | bayes_pls_golite062009 |
| transcription activator activity | 0.53294679084865 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.53285802828572 | bayes_pls_golite062009 |
| transcription repressor activity | 0.513853050429619 | bayes_pls_golite062009 |
| protein binding | 0.035220363090062 | bayes_pls_golite062009 |
