| Protein: | gi|54307514, gi|... |
| Organism: | Photobacterium profundum SS9 |
| Length: | 210 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54307514, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
155.0 | [0..1] | [210..1] |
|
Region A: Residues: [1-210] |
1 11 21 31 41 51
| | | | | |
1 MVPGKPQTDP TLEWFLSHCH IHKYPSKSTL IHAGEKAETL YYIVKGSVAV LIKDEEGKEM 60
61 ILSYLNQGDF IGELGLFEED QERTAWVRAK SPCEVAEISF KKFRQLIQVN PDILMRLSSQ 120
121 MATRLQVTSQ KVGDLAFLDV TGRIAQTLLN LAKQPDAMTH PDGMQIKITR QEIGQIVGCS 180
181 RETVGRILKM LEEQNLISAH GKTIVVYGTR
|
| Detection Method: |  |
| Confidence: | 37.522879 |
| Match: | 1g6nA |
| Description: | Catabolite gene activator protein (CAP), C-terminal domain; Catabolite gene activator protein, N-terminal domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 1.00625548877971 | bayes_pls_golite062009 |
| binding | 0.891226539481379 | bayes_pls_golite062009 |
| nucleic acid binding | 0.59306579636505 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.53285802828572 | bayes_pls_golite062009 |
| DNA binding | 0.47798148720399 | bayes_pls_golite062009 |
| transcription factor activity | 0.159026311884013 | bayes_pls_golite062009 |
| protein binding | 0.094542444184087 | bayes_pls_golite062009 |
