| Protein: | ARGR_MANSM |
| Organism: | Mannheimia succiniciproducens MBEL55E |
| Length: | 155 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ARGR_MANSM.
| Description | E-value | Query Range |
Subject Range |
|
|
196.0 | [0..4] | [154..59] |
|
Region A: Residues: [1-155] |
1 11 21 31 41 51
| | | | | |
1 MAIEKTDNLL TVFKDLLSQE RFGSQSEIVS ALQDLGFSNI NQSKVSRMLT KFGAIRTRNT 60
61 RMEMVYCLPN ELSVPNTSSP LKNLVLDIDH NDFLIVIKTS PGAAQLIARL LDSVGKTEGI 120
121 LGTIAGDDTI FITPTKGTGI KELINTIQQL FENSL
|
| Detection Method: |  |
| Confidence: | 48.221849 |
| Match: | 1b4aA |
| Description: | Arginine repressor (ArgR), N-terminal DNA-binding domain; C-terminal domain of arginine repressor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 3.98990675336286 | bayes_pls_golite062009 |
| DNA binding | 3.4273272886116 | bayes_pls_golite062009 |
| nucleic acid binding | 3.38054693035398 | bayes_pls_golite062009 |
| transcription factor activity | 2.80110428028438 | bayes_pls_golite062009 |
| binding | 2.18911933843505 | bayes_pls_golite062009 |
| transcription activator activity | 0.53294679084865 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.53285802828572 | bayes_pls_golite062009 |
| transcription repressor activity | 0.513853050429619 | bayes_pls_golite062009 |
| protein binding | 0.035220363090062 | bayes_pls_golite062009 |
