| Protein: | sdt-PF |
| Organism: | Drosophila melanogaster |
| Length: | 859 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sdt-PF.
| Description | E-value | Query Range |
Subject Range |
|
|
604.0 | [0..1] | [859..76] |
|
Region A: Residues: [1-98] |
1 11 21 31 41 51
| | | | | |
1 MLTMLSVNQD NGPHREMAVD CPDTFIARNK TPPRYPPPRP PQLNGNAKPV PPPRDHLRVE 60
61 KDGRLVNCSP APQLPDRRAP GNASSGSSGA TTHPLQHQ
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [99-253] |
1 11 21 31 41 51
| | | | | |
1 QIAQIVEPTL EQLDSIKKYQ EQLRRRREEE ERIAQQNEFL RNSLRGSRKL KALQDTATPG 60
61 KAVAQQQQQA TLATQVVGVE NEAYLPDEDQ PQAEQIDGYG ELIAALTRLQ NQLSKSGLST 120
121 LAGRVSAAHS VLASASVAHV LAARTAVLQR RRSRV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [254-366] |
1 11 21 31 41 51
| | | | | |
1 SGPLHHSSLG LQKDIVELLT QSNTAAAIEL GNLLTSHEME GLLLAHDRIA NHTDGTPSPT 60
61 PTPTPAIGAA TGSTLSSPVA GPKRNLGMVV PPPVVPPPLA QRGAMPLPRG ESP
|
| Detection Method: | |
| Confidence: | 2.37 |
| Match: | 1zl8B |
| Description: | NMR structure of L27 heterodimer from C. elegans Lin-7 and H. sapiens Lin-2 scaffold proteins |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [367-497] |
1 11 21 31 41 51
| | | | | |
1 PPVPMPPLAT MPMSMPVNLP MSACFGTLND QNDNIRIIQI EKSTEPLGAT VRNEGEAVVI 60
61 GRIVRGGAAE KSGLLHEGDE ILEVNGQELR GKTVNEVCAL LGAMQGTLTF LIVPAGSPPS 120
121 VGVMGGTTGS Q
|
| Detection Method: | |
| Confidence: | 17.522879 |
| Match: | 1va8A |
| Description: | Solution structure of the PDZ domain of Pals1 protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 3.2595117613307 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide kinase activity | 3.03529700765506 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.83180079733297 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.39826531242265 | bayes_pls_golite062009 |
| protein binding | 2.35875654816667 | bayes_pls_golite062009 |
| nucleotide kinase activity | 1.79696347300128 | bayes_pls_golite062009 |
| guanylate kinase activity | 1.70730560221787 | bayes_pls_golite062009 |
| phosphotransferase activity, phosphate group as acceptor | 1.69528181005421 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 1.68920668586004 | bayes_pls_golite062009 |
| signal transducer activity | 1.51162321843898 | bayes_pls_golite062009 |
| molecular transducer activity | 1.51162321843898 | bayes_pls_golite062009 |
| protein domain specific binding | 0.64214865642772 | bayes_pls_golite062009 |
| transcription regulator activity | 0.387065538161985 | bayes_pls_golite062009 |
| receptor binding | 0.359972518335054 | bayes_pls_golite062009 |
| actin binding | 0.13059495339034 | bayes_pls_golite062009 |
|
Region A: Residues: [498-859] |
1 11 21 31 41 51
| | | | | |
1 LAGLGGAHRD TAVLHVRAHF DYDPEDDLYI PCRELGISFQ KGDVLHVISR EDPNWWQAYR 60
61 EGEEDQTLAG LIPSQSFQHQ RETMKLAIAE EAGLARSRGK DGSGSKGATL LCARKGRKKK 120
121 KKASSEAGYP LYATTAPDET DPEEILTYEE VALYYPRATH KRPIVLIGPP NIGRHELRQR 180
181 LMADSERFSA AVPHTSRARR EGEVPGVDYH FITRQAFEAD ILARRFVEHG EYEKAYYGTS 240
241 LEAIRTVVAS GKICVLNLHP QSLKLLRASD LKPYVVLVAP PSLDKLRQKK LRNGEPFKEE 300
301 ELKDIIATAR DMEARWGHLF DMIIINNDTE RAYHQLLAEI NSLEREPQWV PAQWVHNNRD 360
361 ES
|
| Detection Method: | |
| Confidence: | 56.154902 |
| Match: | 1kjwA |
| Description: | Psd-95; Guanylate kinase-like domain of Psd-95 |
Matching Structure (courtesy of the PDB): |
|
