| Protein: | PNP_PSEAE |
| Organism: | Pseudomonas aeruginosa PAO1 |
| Length: | 701 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PNP_PSEAE.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..700] | [1..699] |
|
|
0.0 | [1..701] | [1..701] |
|
|
0.0 | [2..701] | [3..701] |
|
|
0.0 | [5..697] | [27..720] |
|
|
0.0 | [4..701] | [5..701] |
|
|
0.0 | [2..701] | [3..702] |
|
|
0.0 | [2..701] | [3..702] |
|
|
0.0 | [4..701] | [5..702] |
|
|
0.0 | [4..701] | [5..702] |
|
|
0.0 | [3..701] | [9..706] |
|
Region A: Residues: [1-701] |
1 11 21 31 41 51
| | | | | |
1 MNPVTKQFQF GQSTVTLETG RIARQATGAV LVTMDDVSVL VTVVGAKSPA EGRDFFPLSV 60
61 HYQEKTYAAG RIPGGFFKRE GRPSEKETLT SRLIDRPIRP LFPEGFMNEV QVVCTVVSTN 120
121 KKSDPDIAAM IGTSAALAIS GIPFAGPIGA ARVGFHPEIG YILNPTYEQL QSSSLDMVVA 180
181 GTEDAVLMVE SEADELTEDQ MLGAVLFAHD EFQAVIRAVK ELAAEAGKPA WDWKAPAENT 240
241 VLVNAIKAEL GEAISQAYTI TIKQDRYNRL GELRDQAVAL FAGEEEGKFP ASEVKDVFGL 300
301 LEYRTVRENI VNGKPRIDGR DTRTVRPLRI EVGVLGKTHG SALFTRGETQ ALVVATLGTA 360
361 RDAQLLDTLE GERKDAFMLH YNFPPFSVGE CGRMGSPGRR EIGHGRLARR GVAAMLPTQD 420
421 EFPYTIRVVS EITESNGSSS MASVCGASLA LMDAGVPVKA PVAGIAMGLV KEGEKFAVLT 480
481 DILGDEDHLG DMDFKVAGTD KGVTALQMDI KINGITEEIM EIALGQALEA RLNILGQMNQ 540
541 VIAKPRAELS ENAPTMLQMK IDSDKIRDVI GKGGATIRGI CEETKASIDI EDDGSVKIYG 600
601 ETKEAAEAAK LRVLAITAEA EIGKIYVGKV ERIVDFGAFV NILPGKDGLV HISQISDKRI 660
661 DKVTDVLQEG QEVKVLVLDV DNRGRIKLSI KDVAAAEASG V
|
| Detection Method: |  |
| Confidence: | 157.0 |
| Match: | 1e3hA |
| Description: | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 1 and 4; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 6; Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| ribonuclease activity | 3.62650207668685 | bayes_pls_golite062009 |
| transcription regulator activity | 2.64513435028798 | bayes_pls_golite062009 |
| exoribonuclease activity | 2.49584565422948 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 2.48625785660839 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 2.46667410843173 | bayes_pls_golite062009 |
| RNA binding | 1.96263727771326 | bayes_pls_golite062009 |
| nucleic acid binding | 1.06121115244578 | bayes_pls_golite062009 |
| transcription termination factor activity | 1.01993495617192 | bayes_pls_golite062009 |
| binding | 0.953779727473657 | bayes_pls_golite062009 |
| structural constituent of ribosome | 0.82905129800799 | bayes_pls_golite062009 |
| ATP-dependent peptidase activity | 0.66778558090199 | bayes_pls_golite062009 |
| structural molecule activity | 0.61730676636766 | bayes_pls_golite062009 |
| carbohydrate kinase activity | 0.51810239718467 | bayes_pls_golite062009 |
| DNA binding | 0.42372608430605 | bayes_pls_golite062009 |
| 0.416217645025381 | bayes_pls_golite062009 | |
| hydrolase activity | 0.355379071501158 | bayes_pls_golite062009 |
| catalytic activity | 0.10089766806364 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.0287026367466632 | bayes_pls_golite062009 |
