YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|21203483, gi\|...
Organism:	Staphylococcus aureus subsp. aureus MW2
Length:	181 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21203483, gi|....

Description	E-value	Query Range	Subject Range
gi\|15926043, gi\|... - gi\|15926043\|ref\|NP_373576.1\| hypothetical protein SA0330 [Staphylococcus aureus subsp. aureus N315],... gi\|25507496 - pir\|\|G89799 hypothetical protein SA0330 [imported] - Staphylococcus aureus (strain N315) gi\|90427785, gi\|... - gi\|90583134\|ref\|ZP_01238894.1\| GCN5-related N-acetyltransferase [Staphylococcus aureus subsp. aureus... gi\|14246110, gi\|... - gi\|15923332\|ref\|NP_370866.1\| ribosomal-protein-serine N-acetyltransferase [Staphylococcus aureus sub... gi\|90429740, gi\|... - gi\|90586703\|ref\|ZP_01242395.1\| GCN5-related N-acetyltransferase [Staphylococcus aureus subsp. aureus... gi\|253316557 - gi\|253316557\|ref\|ZP_04839770.1\| hypothetical protein SauraC_10510 [Staphylococcus aureus subsp. aure... gi\|255005137 - gi\|255005137\|ref\|ZP_05143738.2\| hypothetical protein SauraM_01680 [Staphylococcus aureus subsp. aure... gi\|269201990\|ref... - ribosomal-protein-serine acetyltransferase, putative [Staphylococcus aureus subsp. aureus ED98] gi\|156720805, gi... - gi\|156978670\|ref\|YP_001440929.1\| hypothetical protein SAHV_0339 [Staphylococcus aureus subsp. aureus...	143.0	[0..1]	[181..1]
gi\|57652602, gi\|... - gi\|57652602\|ref\|YP_185305.1\| ribosomal-protein-serine acetyltransferase, putative [Staphylococcus au... gi\|151220547, gi... - gi\|151220547\|ref\|YP_001331369.1\| hypothetical protein NWMN_0335 [Staphylococcus aureus subsp. aureus... gi\|88194124, gi\|... - gi\|88194124\|ref\|YP_498913.1\| ribosomal-protein-serine acetyltransferase, putative [Staphylococcus au... gi\|221142650 - gi\|221142650\|ref\|ZP_03567143.1\| N-acetyltransferase [Staphylococcus aureus subsp. aureus str. JKD600... gi\|87126175, gi\|... - gi\|87160201\|ref\|YP_493057.1\| acetyltransferase [Staphylococcus aureus subsp. aureus USA300_FPR3757],... gi\|221139468 - gi\|221139468\|ref\|ZP_03564267.1\| N-acetyltransferase [Staphylococcus aureus subsp. aureus str. JKD600... gi\|160367422, gi... - gi\|161508613\|ref\|YP_001574272.1\| N-acetyltransferase [Staphylococcus aureus subsp. aureus USA300_TCH... gi\|87160201\|ref\|... - acetyltransferase, GNAT family [Staphylococcus aureus subsp. aureus USA300], acetyltransferase, GNAT...	143.0	[0..1]	[181..1]
gi\|52784100, gi\|... - gi\|52784100\|ref\|YP_089929.1\| YnaD [Bacillus licheniformis ATCC 14580], gi\|52346602\|gb\|AAU39236.1\| Yn...	143.0	[0..4]	[178..3]
gi\|42736945, gi\|... - gi\|42781024\|ref\|NP_978271.1\| acetyltransferase [Bacillus cereus ATCC 10987], gi\|42736945\|gb\|AAS40879...	143.0	[0..1]	[176..1]
YP20_BACLI - Uncharacterized N-acetyltransferase p20 OS=Bacillus licheniformis GN=p20 PE=3 SV=1	142.0	[0..1]	[178..1]
gi\|167040456, gi... - gi\|167040456\|ref\|YP_001663441.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X514], gi\|... gi\|255339225, gi... - gi\|255339225\|ref\|ZP_05380065.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter mathranii subsp... gi\|242256373, gi... - gi\|242256373\|ref\|ZP_04801265.1\| GCN5-related N-acetyltransferase [Thermoanaerobacter sp. X513], gi\|2...	141.0	[0..3]	[179..7]
gi\|228945523, gi... - gi\|228945523\|ref\|ZP_04107873.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar monterrey BG... gi\|228661923, gi... - gi\|229121459\|ref\|ZP_04250686.1\| Acetyltransferase, GNAT [Bacillus cereus 95/8201], gi\|228661923\|gb\|E... gi\|229602949, gi... - gi\|229602949\|ref\|YP_002866288.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0248], gi\|... gi\|254684474 - gi\|254684474\|ref\|ZP_05148334.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. CNEV... gi\|254724001 - gi\|254724001\|ref\|ZP_05185787.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. A105... gi\|254734777 - gi\|254734777\|ref\|ZP_05192489.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. West... gi\|254741179 - gi\|254741179\|ref\|ZP_05198867.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Krug... gi\|254755430 - gi\|254755430\|ref\|ZP_05207464.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Voll... gi\|190562568, gi... - gi\|190566433\|ref\|ZP_03019351.1\| acetyltransferase, GNAT family [Bacillus anthracis Tsiankovskii-I], ... gi\|254759967 - gi\|254759967\|ref\|ZP_05211991.1\| acetyltransferase, GNAT family protein [Bacillus anthracis str. Aust... gi\|172083703, gi... - gi\|177650559\|ref\|ZP_02933526.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0174], gi\|1... gi\|196041179, gi... - gi\|196041179\|ref\|ZP_03108474.1\| acetyltransferase, GNAT family [Bacillus cereus NVH0597-99], gi\|1960... gi\|196033308, gi... - gi\|196033308\|ref\|ZP_03100720.1\| acetyltransferase, GNAT family [Bacillus cereus W], gi\|195993742\|gb\|... gi\|218903028, gi... - gi\|218903028\|ref\|YP_002450862.1\| acetyltransferase, GNAT family [Bacillus cereus AH820], gi\|21853799... gi\|47502316, gi\|... - gi\|47527168\|ref\|YP_018517.1\| acetyltransferase [Bacillus anthracis str. 'Ames Ancestor'], gi\|4750231... gi\|30256541, gi\|... - gi\|30261915\|ref\|NP_844292.1\| acetyltransferase [Bacillus anthracis str. Ames], gi\|30256541\|gb\|AAP257... gi\|21399752, gi\|... - gi\|65319192\|ref\|ZP_00392151.1\| COG1670: Acetyltransferases, including N-acetylases of ribosomal prot... gi\|49477413, gi\|... - gi\|49477413\|ref\|YP_036046.1\| ribosomal-protein-alanine acetyltransferase [Bacillus thuringiensis ser... gi\|49184750, gi\|... - gi\|49184750\|ref\|YP_028002.1\| acetyltransferase [Bacillus anthracis str. Sterne], gi\|49178677\|gb\|AAT5... gi\|165869474, gi... - gi\|165869474\|ref\|ZP_02214133.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0488], gi\|1... gi\|167638846, gi... - gi\|167638846\|ref\|ZP_02397121.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0193], gi\|1... gi\|167633179, gi... - gi\|167633179\|ref\|ZP_02391504.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0442], gi\|1... gi\|170707241, gi... - gi\|170707241\|ref\|ZP_02897696.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0389], gi\|1... gi\|170686257, gi... - gi\|170686257\|ref\|ZP_02877479.1\| acetyltransferase, GNAT family [Bacillus anthracis str. A0465], gi\|1... gi\|227006534, gi... - gi\|227815306\|ref\|YP_002815315.1\| acetyltransferase, GNAT family [Bacillus anthracis str. CDC 684], g... gi\|228914503, gi... - gi\|228914503\|ref\|ZP_04078112.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar pulsiensis B... gi\|228832707, gi... - gi\|228926972\|ref\|ZP_04090038.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar pondicherien... gi\|228933204, gi... - gi\|228933204\|ref\|ZP_04096060.1\| Acetyltransferase, GNAT [Bacillus thuringiensis serovar andalousiens...	140.0	[0..1]	[176..1]
gi\|228656344, gi... - gi\|229127228\|ref\|ZP_04256225.1\| Acetyltransferase, GNAT [Bacillus cereus BDRD-Cer4], gi\|228656344\|gb... gi\|30019941, gi\|... - gi\|30019941\|ref\|NP_831572.1\| ribosomal-protein-alanine acetyltransferase [Bacillus cereus ATCC 14579...	140.0	[0..1]	[176..1]
gi\|82655585, gi\|... - gi\|82750054\|ref\|YP_415795.1\| serine N-acetyltransferase [Staphylococcus aureus RF122], gi\|82655585\|e...	140.0	[0..1]	[180..1]
gi\|47557582, gi\|... - gi\|47565592\|ref\|ZP_00236633.1\| acetyltransferase, GNAT family, putative [Bacillus cereus G9241], gi\|...	140.0	[0..1]	[175..1]

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Predicted Domain #1

Region A:
Residues: [1-181]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFGMKVNEQI ILKILEAHDT EALFNLVNRS RNSLREWLPW VDATEQPSDT RAFIKRGLLQ  60
   61 FSDGNGFQCG IWYEGTLVGV IGLHEINRMH RKTSLGYYLD KQFEGHGIMT QAVEALIKYC 120
  121 FEELDLNRIE ISAAVNNEKS RAIPERLGFT REGMLRDNEL LNGIYSSSYI YSLLKSEYDQ 180
  181 K

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.154902
Match:	1nslA
Description:	Probable acetyltransferase YdaF
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
N-acyltransferase activity	5.49691997329072	bayes_pls_golite062009
N-acetyltransferase activity	5.40943450959887	bayes_pls_golite062009
acetyltransferase activity	5.18392099029003	bayes_pls_golite062009
acyltransferase activity	5.09585671981234	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	5.08909636929489	bayes_pls_golite062009
transferase activity, transferring acyl groups	5.03854100484176	bayes_pls_golite062009
histone acetyltransferase activity	4.10984866371134	bayes_pls_golite062009
lysine N-acetyltransferase activity	4.10984866371134	bayes_pls_golite062009
transferase activity	3.07496754543916	bayes_pls_golite062009
catalytic activity	2.34977492703662	bayes_pls_golite062009
glycylpeptide N-tetradecanoyltransferase activity	2.32894326052224	bayes_pls_golite062009
myristoyltransferase activity	2.32894326052224	bayes_pls_golite062009
	1.77375036664919	bayes_pls_golite062009
diamine N-acetyltransferase activity	1.70366130289739	bayes_pls_golite062009
peptide alpha-N-acetyltransferase activity	1.41436843356921	bayes_pls_golite062009
peptide N-acetyltransferase activity	1.41436843356921	bayes_pls_golite062009
ornithine decarboxylase regulator activity	0.242898256634811	bayes_pls_golite062009
ornithine decarboxylase inhibitor activity	0.212532359888719	bayes_pls_golite062009
arginine N-succinyltransferase activity	0.141144689590571	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: