YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30254342, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	284 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30254342, gi|....

Description	E-value	Query Range	Subject Range
gi\|222094497, gi... - gi\|222094497\|ref\|YP_002528557.1\| phospholipase, putative [Bacillus cereus Q1], gi\|221238555\|gb\|ACM11... gi\|228588296, gi... - gi\|229195067\|ref\|ZP_04321842.1\| Serine protease [Bacillus cereus m1293], gi\|228588296\|gb\|EEK46339.1\|... gi\|206744530, gi... - gi\|206977214\|ref\|ZP_03238112.1\| phospholipase, patatin family [Bacillus cereus H3081.97], gi\|2067445... gi\|229154446, gi... - gi\|229154446\|ref\|ZP_04282563.1\| Serine protease [Bacillus cereus ATCC 4342], gi\|228628844\|gb\|EEK8555... gi\|228983946, gi... - gi\|228983946\|ref\|ZP_04144136.1\| Serine protease [Bacillus thuringiensis serovar tochigiensis BGSC 4Y... gi\|42779892, gi\|... - gi\|42779892\|ref\|NP_977139.1\| phospholipase, putative [Bacillus cereus ATCC 10987], gi\|42735809\|gb\|AA...	4.0E-69	[1..284]	[1..284]
gi\|229126172, gi... - gi\|229126172\|ref\|ZP_04255190.1\| Serine protease [Bacillus cereus BDRD-Cer4], gi\|228657164\|gb\|EEL1298... gi\|229108353, gi... - gi\|229108353\|ref\|ZP_04237970.1\| Serine protease [Bacillus cereus Rock1-15], gi\|228674980\|gb\|EEL30207... gi\|30018918, gi\|... - gi\|30018918\|ref\|NP_830549.1\| Serine protease [Bacillus cereus ATCC 14579], gi\|29894460\|gb\|AAP07750.1...	9.0E-69	[1..284]	[1..284]
gi\|52144572, gi\|... - gi\|52144572\|ref\|YP_082257.1\| phospholipase [Bacillus cereus E33L], gi\|51978041\|gb\|AAU19591.1\| possib...	2.0E-68	[1..284]	[1..284]
gi\|47558052, gi\|... - gi\|47564679\|ref\|ZP_00235723.1\| serine protease [Bacillus cereus G9241], gi\|47558052\|gb\|EAL16376.1\| s...	2.0E-68	[1..284]	[1..284]
gi\|163938666, gi... - gi\|89207089\|ref\|ZP_01185637.1\| Patatin [Bacillus weihenstephanensis KBAB4], gi\|89154991\|gb\|EAR75012....	3.0E-68	[1..284]	[1..284]
gi\|74488746, gi\|... - gi\|75763761\|ref\|ZP_00743427.1\| Phospholipase [Bacillus thuringiensis serovar israelensis ATCC 35646]... gi\|228854009, gi... - gi\|228905640\|ref\|ZP_04069569.1\| Serine protease [Bacillus thuringiensis IBL 4222], gi\|228854009\|gb\|E...	1.0E-62	[2..284]	[1..283]
gi\|228598575, gi... - gi\|229184922\|ref\|ZP_04312113.1\| Serine protease [Bacillus cereus BGSC 6E1], gi\|228598575\|gb\|EEK56204... gi\|229122252, gi... - gi\|229122252\|ref\|ZP_04251466.1\| Serine protease [Bacillus cereus 95/8201], gi\|228661101\|gb\|EEL16727.... gi\|218539763, gi... - gi\|218903827\|ref\|YP_002451661.1\| putative phospholipase [Bacillus cereus AH820], gi\|218539763\|gb\|ACK... gi\|196025903, gi... - gi\|196043594\|ref\|ZP_03110832.1\| putative phospholipase [Bacillus cereus 03BB108], gi\|196025903\|gb\|ED... gi\|49477835, gi\|... - gi\|49477835\|ref\|YP_036799.1\| patatin-like phospholipase [Bacillus thuringiensis serovar konkukian st... gi\|196026922, gi... - gi\|196042249\|ref\|ZP_03109529.1\| putative phospholipase [Bacillus cereus NVH0597-99], gi\|196026922\|gb... gi\|118478073, gi... - gi\|118478073\|ref\|YP_895224.1\| patatin-like phospholipase [Bacillus thuringiensis str. Al Hakam], gi\|... gi\|228691652, gi... - gi\|229091707\|ref\|ZP_04222908.1\| Serine protease [Bacillus cereus Rock3-42], gi\|228691652\|gb\|EEL45404... gi\|228831816, gi... - gi\|228927753\|ref\|ZP_04090801.1\| Serine protease [Bacillus thuringiensis serovar pondicheriensis BGSC... gi\|225864679, gi... - gi\|225864679\|ref\|YP_002750057.1\| putative phospholipase [Bacillus cereus 03BB102], gi\|225787682\|gb\|A...	4.0E-62	[2..284]	[1..283]
gi\|25012052, gi\|... - gi\|25012052\|ref\|NP_736447.1\| hypothetical protein gbs2014 [Streptococcus agalactiae NEM316], gi\|2441... gi\|22538194, gi\|... - gi\|22538194\|ref\|NP_689045.1\| hypothetical protein SAG2059 [Streptococcus agalactiae 2603V/R], gi\|225...	5.0E-62	[2..284]	[1..281]

Back

Predicted Domain #1

Region A:
Residues: [1-284]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLENTGLVLE GGGMRGVYTG GILEYFMEQD LYFPYVIGVS AGACHAASYL SRQRNRNKTV  60
   61 NIDYASHPKY LSYKNLWRKR QLFDMDFIFH EIPEKHVPFD FETYFNSPER FLVGTTDCET 120
  121 GQSVYFEKEG TNDDALNLLQ ASSSLPFIAP VVNYRGKQLL DGGISDPIPV RKAQEDGFKK 180
  181 SVVILTRNHG YAKKKSRFGW VAAKAYKKYP NLVNTMLNRY EVYNETLHYI EKEEQAGNLF 240
  241 VIRPEVPLQV DRMEKDTAKL QSLYEQGYED AKRQFADLKA FLQK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	17.30103
Match:	1oxwA
Description:	Patatin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
phospholipase A2 activity	1.98467451720607	bayes_pls_golite062009
phospholipase activity	1.80454369034948	bayes_pls_golite062009
catalytic activity	1.681309422157	bayes_pls_golite062009
lipase activity	1.58686349518315	bayes_pls_golite062009
fatty acid synthase activity	1.20394174397151	bayes_pls_golite062009
[acyl-carrier-protein] S-malonyltransferase activity	0.812816692540436	bayes_pls_golite062009
S-malonyltransferase activity	0.812816692540436	bayes_pls_golite062009
malonyltransferase activity	0.812816692540436	bayes_pls_golite062009
hydrolase activity	0.582505020700489	bayes_pls_golite062009
carboxylesterase activity	0.543259402611534	bayes_pls_golite062009
acyltransferase activity	0.350701756346828	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	0.295883900540457	bayes_pls_golite062009
S-acyltransferase activity	0.279710514295726	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.208678652576559	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: