YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30257264, gi|...
Organism: Bacillus anthracis str. Ames
Length: 329 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30257264, gi|....

Description E-value Query
Range
Subject
Range
gi|40795502 - gi|40795502|gb|AAR91477.1| thermostable alcohol dehydrogenase [Geobacillus sp. M10EXG]
2.0E-93 [1..329] [1..337]
gi|2983768, gi|1... - gi|2983768|gb|AAC07327.1| alcohol dehydrogenase [Aquifex aeolicus VF5], gi|15606558|ref|NP_213938.1|...
gi|7427649 - pir||C70418 probable alcohol dehydrogenase (EC 1.1.1.-) - Aquifex aeolicus
3.0E-93 [1..329] [1..343]
ADH3_GEOSE - Alcohol dehydrogenase OS=Geobacillus stearothermophilus PE=1 SV=1
1.0E-92 [1..329] [1..337]
gi|46196027, gi|... - gi|46198405|ref|YP_004072.1| alcohol dehydrogenase [Thermus thermophilus HB27], gi|46196027|gb|AAS80...
7.0E-92 [1..328] [1..342]
gi|55980435, gi|... - gi|55980435|ref|YP_143732.1| alcohol dehydrogenase [Thermus thermophilus HB8], gi|55771848|dbj|BAD70...
gi|170292134, gi... - gi|170292134|pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alchol Dehydrogenase, gi|1702921...
1.0E-91 [1..328] [1..342]
gi|67860298, gi|... - gi|67932449|ref|ZP_00525592.1| Zinc-containing alcohol dehydrogenase superfamily [Solibacter usitatu...
6.0E-91 [1..328] [1..342]
gi|56419266, gi|... - gi|56419266|ref|YP_146584.1| alcohol dehydrogenase [Geobacillus kaustophilus HTA426], gi|56379108|db...
2.0E-90 [1..328] [1..336]
gi|94969672, gi|... - gi|94969672|ref|YP_591720.1| zinc-binding alcohol dehydrogenase [Candidatus Koribacter versatilis El...
3.0E-90 [1..326] [1..337]
gi|56961828, gi|... - gi|56961828|ref|YP_173550.1| alcohol dehydrogenase [Bacillus clausii KSM-K16], gi|56908062|dbj|BAD62...
2.0E-89 [1..329] [10..346]

Back

Predicted Domain #1
Region A:
Residues: [1-329]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKAIVHQYKK GVEGLENKFL SETHPNAGEV KVKLKAAGLN HRDLFIINNR KEMDLPLVIG  60
   61 SDGAGIVTEI GEGVSADLLQ AEVIINPSIG WENIAEVPEL PEVLGGPKDG TFAEYVIVPA 120
  121 ENVVGKPSYL TWEESGVLAL SALTAYRALF TKGRLKCGEH VLIPGIGGGV ATFAMLFAKA 180
  181 IGAKVSVTSR VENKRKFAET YGADFSFNSS GNWEESLCGG KVDLIIDSIG PATFIKYFDV 240
  241 LNPNGRIVNF GASSGDKIEL PLRALFYNQI DIMGTSMGSR EEFDEMIRFI EKYKIKPIID 300
  301 KVYSLEEAIQ ALSRMEQGEQ FGNIALRME

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 94.09691
Match: 1rjwA
Description: CRYSTAL STRUCTURE OF NAD(+)-DEPENDENT ALCOHOL DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS STRAIN LLD-R
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
ethanol binding 3.52197234018599 bayes_pls_golite062009
NAD or NADH binding 3.39892156245282 bayes_pls_golite062009
oxidoreductase activity 3.09625241707629 bayes_pls_golite062009
methylglyoxal reductase (NADH-dependent) activity 3.00190838171391 bayes_pls_golite062009
L-iditol 2-dehydrogenase activity 3.00103406168296 bayes_pls_golite062009
alcohol dehydrogenase (NAD) activity 2.94416173750168 bayes_pls_golite062009
retinol binding 2.90377414635828 bayes_pls_golite062009
alcohol dehydrogenase activity, zinc-dependent 2.26153457113968 bayes_pls_golite062009
NADPH:quinone reductase activity 2.16668841986245 bayes_pls_golite062009
alcohol binding 2.01620480773869 bayes_pls_golite062009
all-trans retinal binding 1.96535395605564 bayes_pls_golite062009
benzaldehyde dehydrogenase activity 1.81250968237368 bayes_pls_golite062009
catalytic activity 1.79741889688267 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 1.65338499044318 bayes_pls_golite062009
DNA binding 1.61355789916908 bayes_pls_golite062009
transcription regulator activity 1.55390653047158 bayes_pls_golite062009
nucleic acid binding 1.48478425318425 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.47309297191111 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor 1.22416351603098 bayes_pls_golite062009
chaperone binding 1.19079350615542 bayes_pls_golite062009
retinol dehydrogenase activity 1.16811519855038 bayes_pls_golite062009
binding 0.982999356179965 bayes_pls_golite062009
transcription factor activity 0.91090893050278 bayes_pls_golite062009
transporter activity 0.793769336118517 bayes_pls_golite062009
structural molecule activity 0.75267483298133 bayes_pls_golite062009
transmembrane transporter activity 0.635891484075352 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 0.576163737662951 bayes_pls_golite062009
oxidoreductase activity, acting on NADH or NADPH 0.51503848775098 bayes_pls_golite062009
protein binding 0.507836099271263 bayes_pls_golite062009
L-arabinitol 2-dehydrogenase activity 0.382131941157781 bayes_pls_golite062009
coenzyme binding 0.35922330382799 bayes_pls_golite062009
substrate-specific transporter activity 0.300373102236296 bayes_pls_golite062009
active transmembrane transporter activity 0.239024094835991 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors 0.216422278300306 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.165260811069909 bayes_pls_golite062009
methylenetetrahydrofolate dehydrogenase activity 0.124826575912808 bayes_pls_golite062009
methenyltetrahydrofolate cyclohydrolase activity 0.118312276550651 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.0992243118937675 bayes_pls_golite062009
ion transmembrane transporter activity 0.0257250793986203 bayes_pls_golite062009
retinal binding 0.00342169427806049 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle