YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258643, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	263 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258643, gi|....

Description	E-value	Query Range	Subject Range
gi\|42783021, gi\|... - gi\|42783021\|ref\|NP_980268.1\| phospholipase, putative [Bacillus cereus ATCC 10987], gi\|42738948\|gb\|AA... gi\|221241431, gi... - gi\|222097373\|ref\|YP_002531430.1\| phospholipase, putative [Bacillus cereus Q1], gi\|221241431\|gb\|ACM14... gi\|217961408, gi... - gi\|217961408\|ref\|YP_002339976.1\| phospholipase, patatin family [Bacillus cereus AH187], gi\|217067046... gi\|206745033, gi... - gi\|206976723\|ref\|ZP_03237627.1\| phospholipase, patatin family [Bacillus cereus H3081.97], gi\|2067450...	1.0E-67	[1..263]	[1..263]
gi\|51975030, gi\|... - gi\|52141561\|ref\|YP_085268.1\| patatin-like phospholipase [Bacillus cereus E33L], gi\|51975030\|gb\|AAU16...	1.0E-67	[1..263]	[1..263]
gi\|229129205, gi... - gi\|229129205\|ref\|ZP_04258178.1\| Uncharacterized NTE family protein ylbK [Bacillus cereus BDRD-Cer4],... gi\|229111397, gi... - gi\|229111397\|ref\|ZP_04240950.1\| Uncharacterized NTE family protein ylbK [Bacillus cereus Rock1-15], ... gi\|228723859, gi... - gi\|229047612\|ref\|ZP_04193202.1\| Uncharacterized NTE family protein ylbK [Bacillus cereus AH676], gi\|... gi\|228799457, gi... - gi\|228960189\|ref\|ZP_04121846.1\| Uncharacterized NTE family protein ylbK [Bacillus thuringiensis sero... gi\|229152126, gi... - gi\|229152126\|ref\|ZP_04280320.1\| Uncharacterized NTE family protein ylbK [Bacillus cereus m1550], gi\|... gi\|229146499, gi... - gi\|229146499\|ref\|ZP_04274870.1\| Uncharacterized NTE family protein ylbK [Bacillus cereus BDRD-ST24],... gi\|29897571, gi\|... - gi\|30022015\|ref\|NP_833646.1\| Serine protease [Bacillus cereus ATCC 14579], gi\|29897571\|gb\|AAP10847.1...	1.0E-67	[1..263]	[4..266]
gi\|47557080, gi\|... - gi\|47565800\|ref\|ZP_00236839.1\| serine protease [Bacillus cereus G9241], gi\|47557080\|gb\|EAL15409.1\| s...	1.0E-67	[1..263]	[1..263]
gi\|228966949, gi... - gi\|228966949\|ref\|ZP_04127987.1\| Uncharacterized NTE family protein ylbK [Bacillus thuringiensis sero... gi\|228857177, gi... - gi\|228902433\|ref\|ZP_04066587.1\| Uncharacterized NTE family protein ylbK [Bacillus thuringiensis IBL ... gi\|74490243, gi\|... - gi\|75762260\|ref\|ZP_00742147.1\| Serine protease [Bacillus thuringiensis serovar israelensis ATCC 3564...	4.0E-67	[1..263]	[4..266]
gi\|89155630, gi\|... - gi\|89206368\|ref\|ZP_01184927.1\| Patatin [Bacillus weihenstephanensis KBAB4], gi\|89155630\|gb\|EAR75639....	4.0E-67	[1..263]	[1..263]
gi\|49478453, gi\|... - gi\|49478453\|ref\|YP_037989.1\| patatin-like phospholipase [Bacillus thuringiensis serovar konkukian st...	5.0E-67	[1..263]	[1..263]
gi\|89203479, gi\|... - gi\|89203479\|ref\|ZP_01182139.1\| Patatin [Bacillus cereus subsp. cytotoxis NVH 391-98], gi\|89148533\|gb...	7.0E-67	[1..263]	[1..263]
gi\|71847114, gi\|... - gi\|71907493\|ref\|YP_285080.1\| patatin [Dechloromonas aromatica RCB], gi\|71847114\|gb\|AAZ46610.1\| Patat...	2.0E-66	[3..256]	[40..293]
gi\|21111116, gi\|... - gi\|21229637\|ref\|NP_635554.1\| hypothetical protein XCC0159 [Xanthomonas campestris pv. campestris str... gi\|66571845, gi\|... - gi\|66766513\|ref\|YP_241275.1\| hypothetical protein XC_0168 [Xanthomonas campestris pv. campestris str...	6.0E-66	[2..261]	[44..303]

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Predicted Domain #1

Region A:
Residues: [1-263]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKEPKIGLAL GSGGAKGFAH IGVIKVLREN DIPIHLIAGS SMGALVGTFY AASSNVERLY  60
   61 KLANVFKRKY YLDFTVPKMG FIAGKRVKDM IKMFTYNKNL EELDIPTAVV ATDILKGEKV 120
  121 VFTSGPVAEA VRASISVPGV FVPEKIDGRL LVDGGVIDRI PVSVVKELGA DIVIAVDVSP 180
  181 IKVNGEVTSI YDVIMQSIEI MQHELVMNRQ IASDLMMRPA VEQFSSRAFT NIEDIIRVGE 240
  241 VEAEKHVANI HLLIEQWKEK HNV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	22.0
Match:	1oxwA
Description:	Patatin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	2.05174935916901	bayes_pls_golite062009
fatty acid synthase activity	1.78412112171663	bayes_pls_golite062009
phospholipase A2 activity	1.50338784185686	bayes_pls_golite062009
phospholipase activity	1.50224734173655	bayes_pls_golite062009
lipase activity	1.49447522728425	bayes_pls_golite062009
[acyl-carrier-protein] S-malonyltransferase activity	0.928470508323409	bayes_pls_golite062009
S-malonyltransferase activity	0.928470508323409	bayes_pls_golite062009
malonyltransferase activity	0.928470508323409	bayes_pls_golite062009
carboxylesterase activity	0.74701035914366	bayes_pls_golite062009
acyltransferase activity	0.71773926100732	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	0.68660111012331	bayes_pls_golite062009
hydrolase activity	0.64559728461115	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	0.220077432852728	bayes_pls_golite062009
transferase activity, transferring acyl groups	0.12219171272963	bayes_pls_golite062009
S-acyltransferase activity	0.0480003433452798	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: