YRC Public Data Repository - Protein Structure Prediction

Protein:	PHS_SHEON
Organism:	Shewanella oneidensis MR-1
Length:	112 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHS_SHEON.

Description	E-value	Query Range	Subject Range
PHS_SHESR - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella sp. (strain MR-7) GN=Shewmr7_2673 PE...	160.0	[0..1]	[112..1]
PHS_SHESM - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella sp. (strain MR-4) GN=Shewmr4_2606 PE...	160.0	[0..1]	[112..1]
PHS_SHEAM - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella amazonensis (strain ATCC BAA-1098 / ...	159.0	[0..1]	[112..1]
PHS_SHESA - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella sp. (strain ANA-3) GN=Shewana3_2780 ...	159.0	[0..1]	[112..1]
PHS_SHEB5 - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella baltica (strain OS155 / ATCC BAA-109...	159.0	[0..1]	[111..1]
PHS_SHELP - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4...	157.0	[0..1]	[112..1]
PHS_SHEPC - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella putrefaciens (strain CN-32 / ATCC BA... PHS_SHESW - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella sp. (strain W3-18-1) GN=Sputw3181_27... gi\|124547657, gi... - gi\|124547657\|ref\|ZP_01706513.1\| transcriptional coactivator/pterin dehydratase [Shewanella putrefaci...	157.0	[0..1]	[111..1]
PHS_PSE14 - Putative pterin-4-alpha-carbinolamine dehydratase OS=Pseudomonas savastanoi pv. phaseolicola (strain...	157.0	[0..1]	[111..1]
PHS_SHEB9 - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella baltica (strain OS195) GN=Sbal195_15...	157.0	[0..1]	[111..1]
PHS_SHEFN - Putative pterin-4-alpha-carbinolamine dehydratase OS=Shewanella frigidimarina (strain NCIMB 400) GN=...	155.0	[0..1]	[112..1]

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Predicted Domain #1

Region A:
Residues: [1-112]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTALTQMKCE ACQADAPKVT DEELAELIRM IPDWGVQVRD GIMQLERVYK FKNFKLAMAF  60
   61 TNKLAELAEE EFHHPGILTE WGKVTVTWWS HSIKGLHKND FIMAAKTDLL LD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	35.0
Match:	1ru0A
Description:	Crystal structure of DCoH2, a paralog of DCoH, the Dimerization Cofactor of HNF-1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
4-alpha-hydroxytetrahydrobiopterin dehydratase activity	6.37440350862152	bayes_pls_golite062009
carbon-oxygen lyase activity	2.59083795856045	bayes_pls_golite062009
hydro-lyase activity	2.49246983898572	bayes_pls_golite062009
catalytic activity	1.77011790035856	bayes_pls_golite062009
lyase activity	0.381803429978296	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: