| Protein: | YMP0_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 405 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMP0_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..405] | [1..405] |
|
|
3.0E-78 | [38..353] | [6..270] |
|
|
2.0E-73 | [49..337] | [33..348] |
|
|
8.0E-48 | [45..339] | [14..271] |
|
Region A: Residues: [1-167] |
1 11 21 31 41 51
| | | | | |
1 MSTTGPLDAT LIRDVAVATA TKASYDMSDT LYSYLPKVDQ FYIPEWLTMQ FIANNLISFT 60
61 PLFSYGTTII SIEKCKTALG FSIDICATML IASILRISYY LITPYEITLL RQSLVMIFIQ 120
121 LILLRTSLKY RPDEYKYQNL TDVESLSHLI HDIWFEFFSC INRPKFL
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.896 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.692 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.664 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.505 | N/A | N/A | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.477 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
|
Region A: Residues: [168-243] |
1 11 21 31 41 51
| | | | | |
1 SEDWKNLIKS LSFTNLLKFS FKIFLAFFYK ILKFFDPNFK RIGAFWQWDD DKNFWRFLAL 60
61 FATVQILVTF FISNIL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [244-405] |
1 11 21 31 41 51
| | | | | |
1 NWDSLAQGLG SIIGSLGLLV ESLLPLPQIA ILYKLKSVQG FKLILLVSWL CGDTLKITYL 60
61 IFGAKNISAL FVIFALFQMS LDFYIGGQYI YYRYYYPKLR HQHHPNDSNS PSDEDESEMY 120
121 ELDLFNTLQK DVEKALKQDS NDTSDSPQDD QVGKSQAQAV TL
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.736 | 0.204 | cytoplasm | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.745 | 0.103 | cytoplasm | a.47.2 | t-snare proteins |
| View | Download | 0.698 | 0.097 | cytoplasm | a.87.1 | DBL homology domain (DH-domain) |
| View | Download | 0.639 | 0.089 | cytoplasm | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.662 | 0.000 | cytoplasm | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.573 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.550 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.505 | N/A | N/A | f.18.1 | F1F0 ATP synthase subunit A |
| View | Download | 0.480 | N/A | N/A | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.474 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.473 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.464 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.463 | N/A | N/A | a.7.3 | Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain |
| View | Download | 0.442 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.433 | N/A | N/A | a.29.3 | Acyl-CoA dehydrogenase C-terminal domain-like |
| View | Download | 0.425 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.424 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.419 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.417 | N/A | N/A | a.24.2 | Aspartate receptor, ligand-binding domain |
| View | Download | 0.394 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.380 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.362 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.355 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.355 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.354 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.353 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.347 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.332 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.329 | N/A | N/A | a.118.16 | Testis/brain RNA-binding protein (TB-RBP) |
| View | Download | 0.326 | N/A | N/A | a.24.12 | Outer surface protein C (OspC) |
| View | Download | 0.316 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.312 | N/A | N/A | d.173.1 | Methionine synthase activation domain-like |
| View | Download | 0.309 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.300 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.299 | N/A | N/A | a.152.1 | Antioxidant defence protein AhpD |
| View | Download | 0.288 | N/A | N/A | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.286 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.285 | N/A | N/A | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.284 | N/A | N/A | f.35.1 | Multidrug efflux transporter AcrB transmembrane domain |
| View | Download | 0.282 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.282 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.281 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.277 | N/A | N/A | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.274 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.273 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.268 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.264 | N/A | N/A | a.19.1 | Fertilization protein |
| View | Download | 0.261 | N/A | N/A | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.259 | N/A | N/A | a.45.1 | Glutathione S-transferase (GST), C-terminal domain |
| View | Download | 0.256 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.255 | N/A | N/A | a.72.1 | Functional domain of the splicing factor Prp18 |
| View | Download | 0.248 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.247 | N/A | N/A | a.23.1 | HSC20 (HSCB), C-terminal oligomerisation domain |
| View | Download | 0.243 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.242 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.241 | N/A | N/A | a.97.1 | An anticodon-binding domain of class I aminoacyl-tRNA synthetases |
| View | Download | 0.239 | N/A | N/A | a.149.1 | RNase III endonuclease catalytic domain |
| View | Download | 0.236 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.235 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.230 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.230 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.227 | N/A | N/A | a.62.1 | Hepatitis B viral capsid (hbcag) |
| View | Download | 0.226 | N/A | N/A | a.47.1 | STAT |
| View | Download | 0.221 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.218 | N/A | N/A | f.25.1 | Cytochrome c oxidase subunit III-like |
| View | Download | 0.217 | N/A | N/A | a.26.1 | 4-helical cytokines |
| View | Download | 0.212 | N/A | N/A | a.66.1 | Transducin (alpha subunit), insertion domain |
| View | Download | 0.212 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.212 | N/A | N/A | a.24.1 | Apolipoprotein |
| View | Download | 0.211 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.211 | N/A | N/A | a.128.1 | Terpenoid synthases |
| View | Download | 0.211 | N/A | N/A | a.47.2 | t-snare proteins |
| View | Download | 0.210 | N/A | N/A | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.210 | N/A | N/A | a.63.1 | Apolipophorin-III |
| View | Download | 0.207 | N/A | N/A | f.1.3 | delta-Endotoxin (insectocide), N-terminal domain |
| View | Download | 0.207 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.202 | N/A | N/A | a.29.5 | alpha-ketoacid dehydrogenase kinase, N-terminal domain |
| View | Download | 0.201 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.200 | N/A | N/A | a.118.8 | TPR-like |
