| Protein: | UIP5_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 443 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UIP5_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..443] | [1..443] |
|
|
1.0E-85 | [18..360] | [19..317] |
|
|
2.0E-85 | [40..360] | [20..295] |
|
|
2.0E-85 | [18..360] | [19..317] |
|
|
4.0E-83 | [37..360] | [20..309] |
|
|
5.0E-83 | [37..360] | [20..309] |
|
|
6.0E-83 | [15..360] | [16..309] |
|
|
8.0E-81 | [44..362] | [17..290] |
|
Region A: Residues: [1-367] |
1 11 21 31 41 51
| | | | | |
1 MSRDVRAEKL AISLLILSLF LIFQLVAEIY LNNGDQYHTE TSPFTRGRSH VTRVPNHDAS 60
61 LSIPFLDKIN QFWHVGGATQ IRNIQSIKLT QDRDQDKHGL VLSNGIGDNT INDFEIVFTF 120
121 RISHDPTTQL TGDGMCFAIT PENGFLTQNL QSSYAKKQYM MNSQGVIADN TDLMGFPKNL 180
181 PGLFIVLDTY RNQGHDHKEV PFMDVFINVA PESDWYDINS DGELSTSLRL NSRGHIKLKK 240
241 NALWNRVTKL RIIYLESISF LKIDVQYAKE GNYWIELFQT TENLYLPKNM HTGQRYIGCS 300
301 ALNGQLTETV ELLDVSTSEF HWNDMDASIE DTYDYAKEAE LFLEQEFGEV LDREPDEFTK 360
361 WKMIKAQ
|
| Detection Method: |  |
| Confidence: | 78.69897 |
| Match: | 1gv9A_ |
| Description: | Carbohydrate-recognition domain of P58/ERGIC-53 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.80812953968012 | bayes_pls_golite062009 |
| transcription regulator activity | 1.04975759390661 | bayes_pls_golite062009 |
| nucleic acid binding | 1.04598570598417 | bayes_pls_golite062009 |
| DNA binding | 0.795215102771438 | bayes_pls_golite062009 |
| protein binding | 0.507853039018204 | bayes_pls_golite062009 |
| transcription factor activity | 0.31058772088671 | bayes_pls_golite062009 |
|
Region A: Residues: [368-443] |
1 11 21 31 41 51
| | | | | |
1 PNIKTGSQSA EQKTSNNPHS RLFKVVLTIW HYSEILLLIM GIYLFSACIR VFQRRFKKIR 60
61 SRRKRAGSHS VGLLPM
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.511 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.588 | c.55.6 | DNA repair protein MutS, domain II |
| View | Download | 0.588 | c.55.6 | DNA repair protein MutS, domain II |
| View | Download | 0.511 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.506 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.506 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.478 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.478 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.432 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.432 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.395 | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.324 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.307 | a.39.1 | EF-hand |
| View | Download | 0.282 | a.76.1 | Iron-dependent represor protein, dimerization domain |
| View | Download | 0.272 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.272 | a.81.1 | N-terminal domain of DnaB helicase |
| View | Download | 0.261 | a.77.1 | DEATH domain |
| View | Download | 0.245 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.243 | a.57.1 | Protein HNS-dependent expression A; HdeA |
| View | Download | 0.227 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.225 | a.20.1 | PGBD-like |
| View | Download | 0.223 | a.77.1 | DEATH domain |
| View | Download | 0.219 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.211 | a.20.1 | PGBD-like |
