| Protein: | SPB1_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 841 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPB1_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..841] | [1..841] |
|
|
0.0 | [1..841] | [1..841] |
|
|
0.0 | [1..724] | [1..724] |
|
|
0.0 | [1..836] | [1..799] |
|
|
4.0E-98 | [1..829] | [1..834] |
|
|
6.0E-93 | [1..829] | [1..825] |
|
|
2.0E-88 | [5..837] | [4..831] |
|
Region A: Residues: [1-204] |
1 11 21 31 41 51
| | | | | |
1 MGKTQKKNSK GRLDRYYYLA KEKGYRARSS FKIIQINEKY GHFLEKSKVV IDLCAAPGSW 60
61 CQVASKLCPV NSLIIGVDIV PMKPMPNVIT FQSDITTEDC RSKLRGYMKT WKADTVLHDG 120
121 APNVGLGWVQ DAFTQSQLTL QALKLAVENL VVNGTFVTKI FRSKDYNKLI WVFQQLFEKV 180
181 EATKPPASRN VSAEIFVVCK GFKA
|
| Detection Method: |  |
| Confidence: | 226.679424 |
| Match: | 1eizA_ |
| Description: | RNA methyltransferase FtsJ |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| rRNA (guanine) methyltransferase activity | 4.21285117944777 | bayes_pls_golite062009 |
| methyltransferase activity | 4.15445027778357 | bayes_pls_golite062009 |
| rRNA methyltransferase activity | 4.09362182773099 | bayes_pls_golite062009 |
| N-methyltransferase activity | 4.07806017452628 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 4.07153733729662 | bayes_pls_golite062009 |
| protein methyltransferase activity | 3.92746815303714 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 3.39429041855776 | bayes_pls_golite062009 |
| RNA methyltransferase activity | 3.07428840534971 | bayes_pls_golite062009 |
| histone methyltransferase activity | 2.99461585647365 | bayes_pls_golite062009 |
| DNA-methyltransferase activity | 2.43145108778901 | bayes_pls_golite062009 |
| protein-arginine N-methyltransferase activity | 2.41876112831625 | bayes_pls_golite062009 |
| arginine N-methyltransferase activity | 2.41876112831625 | bayes_pls_golite062009 |
| transferase activity | 2.22303238506686 | bayes_pls_golite062009 |
| histone-arginine N-methyltransferase activity | 2.04296107639729 | bayes_pls_golite062009 |
| RNA binding | 1.99752836873461 | bayes_pls_golite062009 |
| rRNA (adenine) methyltransferase activity | 1.83964463328968 | bayes_pls_golite062009 |
| tRNA methyltransferase activity | 1.76571145896453 | bayes_pls_golite062009 |
| rRNA (adenine-N6,N6-)-dimethyltransferase activity | 1.75675289134467 | bayes_pls_golite062009 |
| protein-arginine omega-N monomethyltransferase activity | 1.66871163498737 | bayes_pls_golite062009 |
| catalytic activity | 1.25333584501255 | bayes_pls_golite062009 |
| histone methyltransferase activity (H4-R3 specific) | 1.1103522853299 | bayes_pls_golite062009 |
| transcription regulator activity | 0.914549843668268 | bayes_pls_golite062009 |
| rRNA (uridine-2'-O-)-methyltransferase activity | 0.90544396691236 | bayes_pls_golite062009 |
| protein-arginine omega-N asymmetric methyltransferase activity | 0.89325812193225 | bayes_pls_golite062009 |
| DNA binding | 0.86027591375666 | bayes_pls_golite062009 |
| rRNA (uridine) methyltransferase activity | 0.742142092552002 | bayes_pls_golite062009 |
| site-specific DNA-methyltransferase (adenine-specific) activity | 0.703178429468566 | bayes_pls_golite062009 |
| tRNA (cytosine-5-)-methyltransferase activity | 0.672282175551951 | bayes_pls_golite062009 |
| tRNA (cytosine)-methyltransferase activity | 0.672282175551951 | bayes_pls_golite062009 |
| nucleic acid binding | 0.616949327277483 | bayes_pls_golite062009 |
| binding | 0.383237930789959 | bayes_pls_golite062009 |
| O-methyltransferase activity | 0.250946859465502 | bayes_pls_golite062009 |
| rRNA (guanine-N1-)-methyltransferase activity | 0.234572322347698 | bayes_pls_golite062009 |
| tRNA (adenine-N1-)-methyltransferase activity | 0.1772047818218 | bayes_pls_golite062009 |
| tRNA (adenine)-methyltransferase activity | 0.1772047818218 | bayes_pls_golite062009 |
| mRNA binding | 0.0540207721800283 | bayes_pls_golite062009 |
| snoRNA binding | 0.00848192089639488 | bayes_pls_golite062009 |
|
Region A: Residues: [205-532] |
1 11 21 31 41 51
| | | | | |
1 PKRLDPRLLD PKEVFEELPD GQQNMESKIY NPEKKVRKRQ GYEEGDNLLY HETSILDFVR 60
61 TEDPISMLGE MNKFTIDEND HEWKILKKLK QTTDEFRSCI EDLKVLGKKD FKMILRWRKI 120
121 AREILGIEVK DDAKTEIEVV PLTEEEQIEK DLQGLQEKQR LNVKRERRRK NEMKQKELQR 180
181 MQMNMITPTD IGIEAASLGK ESLFNLKTAE KTGILNDLAK GKKRMIFTDD ELAKDNDIYI 240
241 DENIMIKDKD SAADADDLES ELNAMYSDYK TRRSERDAKF RAKQARGGDN EEEWTGFNEG 300
301 SLEKKEEEGK DYIEDNDDEG VEGDSDDD
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1i84S_ |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [533-629] |
1 11 21 31 41 51
| | | | | |
1 EAITNLISKL KGQEGDHKLS SKARMIFNDP IFNNVEPDLP VNTVNDGIMS SESVGDISKL 60
61 NKKRKHEEMH QKQDEADSSD ESSSDDSDFE IVANDNA
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [630-713] |
1 11 21 31 41 51
| | | | | |
1 SEEFDSDYDS EEEKNQTKKE KHSRDIDIAT VEAMTLAHQL ALGQKNKHDL VDEGFNRYTF 60
61 RDTENLPDWF LEDEKEHSKI NKPI
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 2tmaA_ |
| Description: | Tropomyosin |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [714-841] |
1 11 21 31 41 51
| | | | | |
1 TKEAAMAIKE KIKAMNARPI KKVAEAKARK RMRAVARLEK IKKKAGLIND DSDKTEKDKA 60
61 EEISRLMRKV TKKPKTKPKV TLVVASGRNK GLAGRPKGVK GKYKMVDGVM KNEQRALRRI 120
121 AKKHHKKK
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
