| Protein: | RAEP_YEAST |
| Organism: | Saccharomyces cerevisiae S288c |
| Length: | 603 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAEP_YEAST.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..603] | [1..603] |
|
|
0.0 | [45..434] | [3..374] |
|
|
0.0 | [45..434] | [3..374] |
|
|
0.0 | [45..434] | [3..374] |
|
|
0.0 | [45..434] | [3..374] |
|
|
0.0 | [45..434] | [3..374] |
|
Region A: Residues: [1-494] |
1 11 21 31 41 51
| | | | | |
1 MLSPERRPSM AERRPSFFSF TQNPSPLVVP HLAGIEDPLP ATTPDKVDVL IAGTGMVESV 60
61 LAAALAWQGS NVLHIDKNDY YGDTSATLTV DQIKRWVNEV NEGSVSCYKN AKLYVSTLIG 120
121 SGKYSSRDFG IDLSPKILFA KSDLLSILIK SRVHQYLEFQ SLSNFHTYEN DCFEKLTNTK 180
181 QEIFTDQNLP LMTKRNLMKF IKFVLNWEAQ TEIWQPYAER TMSDFLGEKF KLEKPQVFEL 240
241 IFSIGLCYDL NVKVPEALQR IRRYLTSFDV YGPFPALCSK YGGPGELSQG FCRSAAVGGA 300
301 TYKLNEKLVS FNPTTKVATF QDGSKVEVSE KVIISPTQAP KDSKHVPQQQ YQVHRLTCIV 360
361 ENPCTEWFNE GESAAMVVFP PGSLKSGNKE VVQAFILGAG SEICPEGTIV WYLSTTEQGP 420
421 RAEMDIDAAL EAMEMALLRE SSSGLENDEE IVQLTGNGHT IVNSVKLGQS FKEYVPRERL 480
481 QFLFKLYYTQ YTST
|
| Detection Method: |  |
| Confidence: | 418.228787 |
| Match: | 1gnd__ |
| Description: | Guanine nucleotide dissosiation inhibitor, GDI |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| small GTPase regulator activity | 1.82777033221452 | bayes_pls_golite062009 |
| binding | 1.71679209220564 | bayes_pls_golite062009 |
| GTPase regulator activity | 1.69589677829425 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 1.67690582043816 | bayes_pls_golite062009 |
| transporter activity | 1.29839290134235 | bayes_pls_golite062009 |
| transcription regulator activity | 1.27958088282173 | bayes_pls_golite062009 |
| nucleic acid binding | 1.26584665095879 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.07862908893913 | bayes_pls_golite062009 |
| catalytic activity | 1.03127962968326 | bayes_pls_golite062009 |
| DNA binding | 1.02814395937345 | bayes_pls_golite062009 |
| enzyme regulator activity | 1.00883251592654 | bayes_pls_golite062009 |
| amine oxidase activity | 0.93095855430028 | bayes_pls_golite062009 |
| transcription factor activity | 0.569299976584703 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.556967966402473 | bayes_pls_golite062009 |
| GDP-dissociation inhibitor activity | 0.387378304822822 | bayes_pls_golite062009 |
| protein binding | 0.347133050347128 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.31459693204333 | bayes_pls_golite062009 |
|
Region A: Residues: [495-603] |
1 11 21 31 41 51
| | | | | |
1 PPFGVVNSSF FDVNQDLEKK YIPGASDNGV IYTTMPSAEI SYDEVVTAAK VLYEKIVGSD 60
61 DDFFDLDFED EDEIQASGVA NAEQFENAID DDDDVNMEGS GEFVGEMEI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.246 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.208 | d.109.1 | Actin depolymerizing proteins |
| View | Download | 0.285 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.285 | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.263 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.263 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.246 | c.3.1 | FAD/NAD(P)-binding domain |
| View | Download | 0.212 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.208 | d.109.1 | Actin depolymerizing proteins |
