Protein: | RAD59_YEAST |
Organism: | Saccharomyces cerevisiae S288c |
Length: | 238 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAD59_YEAST.
Description | E-value | Query Range |
Subject Range |
|
4.0E-99 | [1..238] | [1..238] |
|
1.0E-76 | [9..213] | [5..203] |
|
2.0E-70 | [41..226] | [30..197] |
|
2.0E-70 | [41..226] | [30..197] |
|
1.0E-69 | [41..226] | [30..197] |
|
4.0E-67 | [41..230] | [19..198] |
Region A: Residues: [1-173] |
1 11 21 31 41 51 | | | | | | 1 MTIQAKPSSS ISYDSTTYGT APGLDIKEFQ IIEDWNGRPA SAWSVQRIGL LQSKIERYTY 60 61 NIYHNNKYGK HNLSKLIPGH ALIQFANETF GYDGWRMDVI DVEARECQPF TAVNNGENTN 120 121 TSEVKYTVVA EAQVKVTLKD GTNTQCGGLG RITLSSRGEC YNRSKKEAVG DAL |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Term | Confidence | Notes |
binding | 3.09705138687537 | bayes_pls_golite062009 |
nucleic acid binding | 2.62582371207063 | bayes_pls_golite062009 |
RNA binding | 1.51047378734681 | bayes_pls_golite062009 |
protein binding | 1.33336414936007 | bayes_pls_golite062009 |
DNA binding | 1.09648705416581 | bayes_pls_golite062009 |
transcription regulator activity | 0.558060375765317 | bayes_pls_golite062009 |
double-stranded RNA binding | 0.33006862628358 | bayes_pls_golite062009 |
structure-specific DNA binding | 0.109630981204183 | bayes_pls_golite062009 |
Region A: Residues: [174-238] |
1 11 21 31 41 51 | | | | | | 1 KKALLSFEKI ILDYETKITN NYYVDGLYGS KKIKNEANTN YNLLSATNSK PTFIKLEDAK 60 61 GTHIK |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.825 | 0.036 | DNA strand annealing activity | d.50.1 | dsRNA-binding domain-like |