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View Structure Prediction Details

Protein: gi|20806970
Organism: Caldanaerobacter subterraneus subsp. tengcongensis
Length: 135 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20806970.

Description E-value Query
Range
Subject
Range
gi|242232286, gi... - gi|242256209|ref|ZP_04801104.1| cytidine deaminase [Thermoanaerobacter sp. X513], gi|242232286|gb|EE...
gi|241903470, gi... - gi|241903470|ref|ZP_04788193.1| cytidine deaminase [Thermoanaerobacter brockii subsp. finnii Ako-1],...
gi|114805408, gi... - gi|167039068|ref|YP_001662053.1| cytidine deaminase [Thermoanaerobacter sp. X514], gi|166853308|gb|A...
gi|76797042, gi|... - gi|76797042|ref|ZP_00779385.1| Cytidine deaminase, homotetrameric [Thermoanaerobacter ethanolicus AT...
199.0 [0..1] [135..1]
gi|38492430, gi|... - gi|38492431|pdb|1MQ0|B Chain B, Crystal Structure Of Human Cytidine Deaminase, gi|38492430|pdb|1MQ0|...
193.0 [0..1] [135..4]
gi|218537160, gi... - gi|218903047|ref|YP_002450881.1| cytidine deaminase [Bacillus cereus AH820], gi|218537160|gb|ACK8955...
gi|228826393, gi... - gi|228933232|ref|ZP_04096088.1| Cytidine deaminase [Bacillus thuringiensis serovar andalousiensis BG...
gi|196033344, gi... - gi|196033344|ref|ZP_03100756.1| cytidine deaminase [Bacillus cereus W], gi|195993778|gb|EDX57734.1| ...
gi|228832726, gi... - gi|228926991|ref|ZP_04090057.1| Cytidine deaminase [Bacillus thuringiensis serovar pondicheriensis B...
gi|190566429, gi... - gi|190566429|ref|ZP_03019347.1| cytidine deaminase [Bacillus anthracis Tsiankovskii-I], gi|190562564...
gi|228914521, gi... - gi|228914521|ref|ZP_04078130.1| Cytidine deaminase [Bacillus thuringiensis serovar pulsiensis BGSC 4...
gi|172083639, gi... - gi|177650495|ref|ZP_02933462.1| cytidine deaminase [Bacillus anthracis str. A0174], gi|172083639|gb|...
gi|227815286, gi... - gi|227815286|ref|YP_002815295.1| cytidine deaminase [Bacillus anthracis str. CDC 684], gi|227006681|...
gi|167638711, gi... - gi|167638711|ref|ZP_02396986.1| cytidine deaminase [Bacillus anthracis str. A0193], gi|167513175|gb|...
gi|229603514, gi... - gi|229603514|ref|YP_002866302.1| cytidine deaminase [Bacillus anthracis str. A0248], gi|229267922|gb...
gi|167531512, gi... - gi|167633474|ref|ZP_02391799.1| cytidine deaminase [Bacillus anthracis str. A0442], gi|167531512|gb|...
gi|228661941, gi... - gi|229121477|ref|ZP_04250704.1| Cytidine deaminase [Bacillus cereus 95/8201], gi|228661941|gb|EEL175...
gi|165869405, gi... - gi|165869405|ref|ZP_02214064.1| cytidine deaminase [Bacillus anthracis str. A0488], gi|164714845|gb|...
gi|228692429, gi... - gi|229090909|ref|ZP_04222135.1| Cytidine deaminase [Bacillus cereus Rock3-42], gi|228692429|gb|EEL46...
gi|228945541, gi... - gi|228945541|ref|ZP_04107891.1| Cytidine deaminase [Bacillus thuringiensis serovar monterrey BGSC 4A...
gi|254741196 - gi|254741196|ref|ZP_05198884.1| cytidine deaminase [Bacillus anthracis str. Kruger B]
gi|254734795 - gi|254734795|ref|ZP_05192507.1| cytidine deaminase [Bacillus anthracis str. Western North America US...
gi|254721195 - gi|254721195|ref|ZP_05182985.1| cytidine deaminase [Bacillus anthracis str. A1055]
gi|254684491 - gi|254684491|ref|ZP_05148351.1| cytidine deaminase [Bacillus anthracis str. CNEVA-9066]
gi|254759985 - gi|254759985|ref|ZP_05212009.1| cytidine deaminase [Bacillus anthracis str. Australia 94]
gi|254755448 - gi|254755448|ref|ZP_05207482.1| cytidine deaminase [Bacillus anthracis str. Vollum]
gi|52143527, gi|... - gi|52143527|ref|YP_083301.1| cytidine deaminase [Bacillus cereus E33L], gi|51976996|gb|AAU18546.1| c...
gi|49184769, gi|... - gi|49184769|ref|YP_028021.1| cytidine deaminase [Bacillus anthracis str. Sterne], gi|49178696|gb|AAT...
gi|49332706, gi|... - gi|49481150|ref|YP_036067.1| cytidine deaminase [Bacillus thuringiensis serovar konkukian str. 97-27...
gi|30261929, gi|... - gi|30261929|ref|NP_844306.1| cytidine deaminase [Bacillus anthracis str. Ames], gi|30256555|gb|AAP25...
gi|47527190, gi|... - gi|47527190|ref|YP_018539.1| cytidine deaminase [Bacillus anthracis str. 'Ames Ancestor'], gi|475023...
190.0 [0..5] [134..2]
gi|28204084, gi|... - gi|28211642|ref|NP_782586.1| cytidine deaminase [Clostridium tetani E88], gi|28204084|gb|AAO36523.1|...
190.0 [0..1] [134..7]
gi|108998740 - gi|108998740|ref|XP_001096632.1| PREDICTED: similar to cytidine deaminase [Macaca mulatta]
189.0 [0..1] [135..10]
gi|47570605, gi|... - gi|47570605|ref|ZP_00241221.1| cytidine deaminase [Bacillus cereus G9241], gi|47552728|gb|EAL11163.1...
187.0 [0..5] [134..2]
gi|52786456, gi|... - gi|52786456|ref|YP_092285.1| hypothetical protein BLi02721 [Bacillus licheniformis ATCC 14580], gi|5...
186.0 [0..7] [133..4]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYRDYEKLI EIAKEARENA YAPYSNFKVG ACVLTEDGNI YKGCNIENAS FGLTVCAERV  60
   61 AMFNAYSGGE RKLKAIAVVA DTDGPVSPCG ACRQVMMELG GEDMVVILSN MKGDHAIMTV 120
  121 RDLLPGAFTS KDMEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.0
Match: 1mq0A
Description: Crystal Structure of Human Cytidine Deaminase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cytidine deaminase activity 4.42667374679603 bayes_pls_golite062009
deaminase activity 2.76997916054448 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 2.27736397496642 bayes_pls_golite062009
catalytic activity 1.70756445127105 bayes_pls_golite062009
binding 1.64474382695496 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.51294035758003 bayes_pls_golite062009
IMP cyclohydrolase activity 1.34771936728813 bayes_pls_golite062009
receptor binding 1.25331530291023 bayes_pls_golite062009
hydrolase activity 1.20889076546073 bayes_pls_golite062009
phosphoribosylaminoimidazolecarboxamide formyltransferase activity 1.06178740854563 bayes_pls_golite062009
nucleoside binding 0.66793245260795 bayes_pls_golite062009
hydroxymethyl-, formyl- and related transferase activity 0.36832789692523 bayes_pls_golite062009
cyclohydrolase activity 0.308525511259279 bayes_pls_golite062009
transition metal ion binding 0.25533482618887 bayes_pls_golite062009
protein binding 0.072557222523031 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 0.0520808212384716 bayes_pls_golite062009

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