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Protein Overview: gi|30261929, gi|...

General Information:
Name(s) found: gi|30261929 [NCBI NR]
gi|30256555 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30261929|ref|NP_844306.1| cytidine deaminase [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30256555|gb|AAP25792.1| cytidine deaminase [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 131 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyrimidine salvage [ISSLink to PubMed article]
    Molecular Function: cytidine deaminase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKKKYIEEA NKMLSKAYIP YSKFPVGAAL VTKEGKIYTG CNIENASYGL CNCAERTAIF  60
   61 KAVSEGERDF SYLVITGETD GPISPCGACR QVIAEFCDPK MPVLLTNVKG DEKEVTVEQL 120
  121 LPGAFTNDDL K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 49.30103 No description for 2d30A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cytidine deaminase activity
    		•  4.42667374679603 bayes_pls_golite062009
  • deaminase activity
    		•  2.76997916054448 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  2.27736397496642 bayes_pls_golite062009
  • catalytic activity
    		•  1.70756445127105 bayes_pls_golite062009
  • binding
    		•  1.64474382695496 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.51294035758003 bayes_pls_golite062009
  • IMP cyclohydrolase activity
    		•  1.34771936728813 bayes_pls_golite062009
  • receptor binding
    		•  1.25331530291023 bayes_pls_golite062009
  • hydrolase activity
    		•  1.20889076546073 bayes_pls_golite062009
  • phosphoribosylaminoimidazolecarboxamide formyltransferase activity
    		•  1.06178740854563 bayes_pls_golite062009
  • nucleoside binding
    		•  0.66793245260795 bayes_pls_golite062009
  • hydroxymethyl-, formyl- and related transferase activity
    		•  0.36832789692523 bayes_pls_golite062009
  • cyclohydrolase activity
    		•  0.308525511259279 bayes_pls_golite062009
  • transition metal ion binding
    		•  0.25533482618887 bayes_pls_golite062009
  • protein binding
    		•  0.072557222523031 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.0520808212384716 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle