| Protein: | CPL2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 770 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CPL2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
533.0 | [0..1] | [770..1] |
|
|
404.0 | [0..10] | [504..28] |
|
|
398.0 | [0..7] | [762..7] |
|
|
317.0 | [0..45] | [501..24] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MNRLGHKSVV YHGDLRLGEL DVNHVSSSHE FRFPNDEIRI HHLSPAGERC PPLAILQTIA 60
61 SFAVRCKLES SAPVKSQELM HLHAVCFHEL KTAVVMLGDE EIHLVAMPSK EKKFPCFWCF 120
121 SVPSGLYDSC LRMLNTRCLS IVFD
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [145-371] |
1 11 21 31 41 51
| | | | | |
1 LDETLIVANT MKSFEDRIEA LKSWISREMD PVRINGMSAE LKRYMDDRML LKQYIDNDYA 60
61 FDNGVLLKAQ PEEVRPTSDG QEKVCRPVIR LPEKNTVLTR IKPEIRDTSV LVKLRPAWEE 120
121 LRSYLTAKTR KRFEVYVCTM AERDYALEMW RLLDPEAHLI SLKELRDRIV CVKPDAKKSL 180
181 LSVFNGGICH PKMAMVIDDR MKVWEDKDQP RVHVVSAYLP YYAPQAE
|
| Detection Method: | |
| Confidence: | 16.09691 |
| Match: | 1ta0A |
| Description: | Three-dimensional structure of a RNA-polymerase II binding protein with associated ligand. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [372-484] |
1 11 21 31 41 51
| | | | | |
1 TALVVPHLCV ARNVACNVRG YFFKEFDESL MSSISLVYYE DDVENLPPSP DVSNYVVIED 60
61 PGFASNGNIN APPINEGMCG GEVERRLNQA AAADHSTLPA TSNAEQKPET PKP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [485-634] |
1 11 21 31 41 51
| | | | | |
1 QIAVIPNNAS TATAAALLPS HKPSLLGAPR RDGFTFSDGG RPLMMRPGVD IRNQNFNQPP 60
61 ILAKIPMQPP SSSMHSPGGW LVDDENRPSF PGRPSGLYPS QFPHGTPGSA PVGPFAHPSH 120
121 LRSEEVAMDD DLKRQNPSRQ TTEGGISQNH
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [635-770] |
1 11 21 31 41 51
| | | | | |
1 LVSNGREHHT DGGKSNGGQS HLFVSALQEI GRRCGSKVEF RTVISTNKEL QFSVEVLFTG 60
61 EKIGIGMAKT KKDAHQQAAE NALRSLAEKY VAHVAPLARE TEKGPENDNG FLWESSEDVS 120
121 NKGLEEEAPK ENISEL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
