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Protein Overview: CPL2_ARATH

General Information:
Name(s) found: CPL2_ARATH [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • RNA polymerase II C-terminal domain phosphatase-like 2 OS=Arabidopsis thaliana GN=CPL2 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 771 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: response to osmotic stress [IMP]
    developmental growth [IMP]
    response to auxin stimulus [IMP]
    Molecular Function: double-stranded RNA binding [ISS]
    phosphatase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLGHKSVV YHGDLRLGEL DVNHVSSSHE FRFPNDEIRI HHLSPAGERC PPLAILQTIA  60
   61 SFAVRCKLES SAPVKSQELM HLHAVCFHEL KTAVVMLGDE EIHLVAMPSK EKKFPCFWCF 120
  121 SVPSGLYDSC LRMLNTRCLS IVFDLDETLI VANTMKSFED RIEALKSWIS REMDPVRING 180
  181 MSAELKRYMD DRMLLKQYID NDYAFDNGVL LKAQPEEVRP TSDGQEKVCR PVIRLPEKNT 240
  241 VLTRIKPEIR DTSVLVKLRP AWEELRSYLT AKTRKRFEVY VCTMAERDYA LEMWRLLDPE 300
  301 AHLISLKELR DRIVCVKPDA KKSLLSVFNG GICHPKMAMV IDDRMKVWED KDQPRVHVVS 360
  361 AYLPYYAPQA EACALVVPHL CVARNVACNV RGYFFKEFDE SLMSSISLVY YEDDVENLPP 420
  421 SPDVSNYVVI EDPGFASNGN INAPPINEGM CGGEVERRLN QAAAADHSTL PATSNAEQKP 480
  481 ETPKPQIAVI PNNASTATAA ALLPSHKPSL LGAPRRDGFT FSDGGRPLMM RPGVDIRNQN 540
  541 FNQPPILAKI PMQPPSSSMH SPGGWLVDDE NRPSFPGRPS GLYPSQFPHG TPGSAPVGPF 600
  601 AHPSHLRSEE VAMDDDLKRQ NPSRQTTEGG ISQNHLVSNG REHHTDGGKS NGGQSHLFVS 660
  661 ALQEIGRRCG SKVEFRTVIS TNKELQFSVE VLFTGEKIGI GMAKTKKDAH QQAAENALRS 720
  721 LAEKYVAHVA PLARETEKGP ENDNGFLWES SEDVSNKGLE EEAPKENISE L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] deduced N/A No confident structure predictions are available.
    2 View Details [145..391] PSI-BLAST 43.39794 No description for 2ghqA was found.
    3 View Details [392..682] PSI-BLAST 3.69897 No description for 1y0fA was found.
    4 View Details [683..771] FFAS03 1.54 Crystal structure of rnt1p dsRBD


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle