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Protein Overview: gi|222619564, gi...

General Information:
Name(s) found: gi|56785358 [NCBI NR]
gi|56784824 [NCBI NR]
gi|222619564 [NCBI NR]
gi|115441141 [NCBI NR]
gi|113534381 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|56785358|dbj|BAD82316.1| C-terminal domain phosphatase-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|56784824|dbj|BAD82045.1| C-terminal domain phosphatase-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222619564|gb|EEE55696.1| hypothetical protein OsJ_04124 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115441141|ref|NP_001044850.1| Os01g0857000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113534381|dbj|BAF06764.1| Os01g0857000 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 756 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPRAPPQA AVPGGGAGAT AGGVTMRMFH GDVFLGEAEV FPMKQGAEGS LPFPSNEIRI  60
   61 SHLSPTSERC PPLAILQTIA PFSVRCKLQA KLMPPHPSLH RLYLTCFNEY KSAVVVVGDE 120
  121 ELHLVAMPSK VEKVPCFWCC SVRSGIYAAS VGMLNLRCLA IVFDLDETLI VANTMKSFED 180
  181 RIEMLSRRMD IEDDPVRIAG MSAEIKRYIE DRELLKEFID TDTVTDNGRI VGTQKEEVLP 240
  241 ISGGQERVLR PVIRLPERNA ILTRINPEVR DTSVFVKLRP AWEDLRSYLT AKGRKRFEVY 300
  301 VCTMAERDYA LEMWRLLDPE ANLISSHNLA ERVVCVKSGS KKCLQNVFKD KGCHPKMAMV 360
  361 IDDRLQVWDE KDQPRVHVVP AYTPYYAPQA EMANAVPVLC VARNVACNVR GGFFREFDEN 420
  421 LLRKVFELMY ENELLDLPYA PDVGDYLVCE DTNFAPNNKD VAPIPEGMSG AEVGKRLNGL 480
  481 AYPRDQKQIP SSTRLSDDDG VALRGIPGGT NIQSNGGSLA TTPSLFVTVL QEIGRLCESR 540
  541 VEFRSTVSSG KNMQFSVEVL FSNEKIGIGI GKTRDEAQVL AAEKALQNLE SNYLSFMAPV 600
  601 AGVLNKDVNK PPGSGNGFLE DITLSEDISM EEPSGSTLKE QDHSKALDRL SSVISLIREL 660
  661 CLEDQHVVFR DQVRDSGSAL NGEYHFQAEL GGQILGRGID LNKDFAKLQA AEEALKTLKT 720
  721 TTDPQIKKHL RPMQQLNFPL YPTEVSLIML KCEASC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..189] deduced N/A No confident structure predictions are available.
    2 View Details [190..428] PSI-BLAST 46.09691 No description for 2hhlA was found.
    3 View Details [429..494] deduced N/A No confident structure predictions are available.
    4 View Details [495..756] PSI-BLAST 8.69897 dsRNA-dependent protein kinase pkr

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.602312874472495 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.56

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle