| Protein: | gi|50897176, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50897176, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..1] | [457..1] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MAASATLMSM AHERKVENLR GFMVNLANSR DFSLPETKLF QQKFLDLCLS RTPDHPTYSA 60
61 MIFIAIMDLN KEGGASEDAI SEFIKSKYKN LPFAHTNLLS HHLAKLVEKR EILCDCNNDC 120
121 YSLPGEKKTV ASTDVQRKS
|
| Detection Method: |  |
| Confidence: | 6.09691 |
| Match: | 1hstA |
| Description: | Histone H5, globular domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.835523092977445 | bayes_pls_golite062009 |
| transcription regulator activity | 0.4843036104266 | bayes_pls_golite062009 |
| nucleic acid binding | 0.37117756729668 | bayes_pls_golite062009 |
| DNA binding | 0.3118855114645 | bayes_pls_golite062009 |
|
Region A: Residues: [140-457] |
1 11 21 31 41 51
| | | | | |
1 DLITVRTNDQ RAADEVMTCQ NKEESVEILK SGDPKVVLLE EQSLTKSRTG SKRKACCVIN 60
61 VIEVMDTEDN GFKAGLRDST VQIPRKEGVV EVVDVENSEN EARIEANSRG GELYEVAVLY 120
121 KQNDVLMEES GKEAMETSSI VRKAKLRRTS NTTKENVEVT SEAYKKLWEC QTEACSNIIA 180
181 LEKMLKQCKE KDQQNKAVSE IDDVSRLPLS MESCRELWKA AQKLQSQLSE IIDSCDETVV 240
241 PYSVSPGCEL EGISKGLCKE DPKMKTPRGN NGSEKPSTQL EQKEREKSSK KKPQVKKTRI 300
301 KSLRDIGITA VRKSPRFS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
