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View Structure Prediction Details

Protein: gi|186531184, gi...
Organism: Arabidopsis thaliana
Length: 626 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|186531184, gi....

Description E-value Query
Range
Subject
Range
gi|82469919 - gi|82469919|gb|ABB77210.1| EMF2 [Dendrocalamus latiflorus]
959.0 [0..1] [625..1]
EMF2_ARATH - Polycomb group protein EMBRYONIC FLOWER 2 OS=Arabidopsis thaliana GN=EMF2 PE=1 SV=2
952.0 [0..1] [626..1]
gi|66796111 - gi|66796111|dbj|BAD99131.1| HvEMF2b [Hordeum vulgare]
940.0 [0..1] [625..1]
gi|115478460, gi... - gi|51091709|dbj|BAD36510.1| putative VEF family protein [Oryza sativa Japonica Group], gi|115478460|...
934.0 [0..21] [624..1]
gi|62275661 - gi|62275661|gb|AAX78232.1| embryonic flower 2 [Triticum aestivum]
931.0 [0..1] [625..1]
gi|90102224 - gi|90102224|gb|ABD85300.1| embryonic flower 2 [Yucca filamentosa]
909.0 [0..1] [625..1]
gi|90102226 - gi|90102226|gb|ABD85301.1| polycomb group protein EMF2 [Asparagus officinalis]
896.0 [0..1] [625..1]
gi|85062577 - gi|85062577|gb|ABC69154.1| EMF-like [Zea mays]
894.0 [0..1] [625..1]
gi|35187161 - gi|35187161|gb|AAQ84239.1| EMF protein [Oryza sativa]
837.0 [0..1] [625..1]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGIPLVSRE TSSCSRSTEQ MCHEDSRLRI SEEEEIAAEE SLAAYCKPVE LYNIIQRRAI  60
   61 RNPLFLQRCL HYKIEAKHKR RIQMTVFLSG AIDAG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VQTQKLFPLY ILLARLVSPK PVAEYSAVYR FSRACILTGG LGVDGVSQAQ ANFLLPDMNR  60
   61 LALEAKSGSL AILFISFAGA QNSQFGIDSG KIHSGNIGGH CLWSKIPLQS LYASWQKSPN 120
  121 MDLGQRVDTV SLVEMQPCFI KLKSMSEEKC VSIQVPSNPL TSSSPQQVQV TISAEEVGST 180
  181 EKSPYSSFSY NDISSSSLLQ IIRLRTGNVV FNYRYYNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [314-385]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLQKTEVTED FSCPFCLVKC ASFKGLRYHL PSTHDLLNFE FWVTEEFQAV NVSLKTETMI  60
   61 SKVNEDDVDP KQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [386-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTFFFSRRRQ KSQVRSSRQG PHLGLGCEVL DKTDDAHSVR SEKSRIPPGK HYERIGGAES  60
   61 GQRVPPGTSP ADVQSCGDPD YVQSIAGSTM LQFAKTRKIS IER

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [489-545]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDLRNRSLLQ KRQFFHSHRA QPMALEQVLS DRDSEDEVDD DVADFEDRRM LDDFVDV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [546-626]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TKDEKQMMHM WNSFVRKQRV LADGHIPWAC EAFSRLHGPI MVRTPHLIWC WRVFMVKLWN  60
   61 HGLLDARTMN NCNTFLEQLQ I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.847 N/A N/A a.118.1 ARM repeat


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