| Protein: | gi|52353567, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 488 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52353567, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
579.0 | [0..32] | [488..69] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MLRTGGGARA TAAAQLLSSS SSPPPLRLPR RFLSLTATPY PLYYDLLLYR PSYPNPPKSS 60
61 AADDRHTRPT DDHLDRAKRR YLRKRRSRLL PDPDATTAKP SSSSSSEFVE LKPEVVDFPR 120
121 LHAREEALYF HDAFALPWEK DKHYRMLYRL EKKYFPDQSL DNAFVPADAS PPSSDAADKG 180
181 LVFFDDDDNN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [191-258] |
1 11 21 31 41 51
| | | | | |
1 KEAEVKKKKD GEDRGEVLER KVEDFFRSLK KGPGHGEANV MKAKKKEPPQ VRHEADEWPQ 60
61 PHLASRRT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [259-488] |
1 11 21 31 41 51
| | | | | |
1 ELPPRWNGPT GTVVLIDKPK GWTSFTVCGK LRRLVNVQKV GHAGTLDPMA TGLLIVCVGK 60
61 ATKVVDRYQG MVKGYSGVFR LGEATSTWDA DSPVIQREPW EHIKDEDIRK VAASFRGEIW 120
121 QVPPMFSAIK VGGEKMYDKA RRGETVELSP RRISIHQFDI ERSLEDRQNL IFRVICSKGT 180
181 YIRSLCADLG KALGSCAHLT ALRRDSIGDF SVNDAWSFAE LEEQITKGYL
|
| Detection Method: | |
| Confidence: | 82.39794 |
| Match: | 1r3fA |
| Description: | Crystal Structure of tRNA Pseudouridine Synthase TruB and Its RNA Complex: RNA-protein Recognition Through a Combination of Rigid Docking and Induced Fit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| pseudouridine synthase activity | 5.60483019625575 | bayes_pls_golite062009 |
| intramolecular transferase activity | 4.62815459483632 | bayes_pls_golite062009 |
| isomerase activity | 3.43067391737824 | bayes_pls_golite062009 |
| catalytic activity | 2.39224964671205 | bayes_pls_golite062009 |
