| Protein: | gi|110741994, gi... |
| Organism: | Arabidopsis thaliana |
| Length: | 753 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110741994, gi....
| Description | E-value | Query Range |
Subject Range |
|
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744.0 | [0..3] | [743..750] |
|
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658.0 | [0..157] | [746..1158] |
|
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655.0 | [0..85] | [708..865] |
|
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642.0 | [0..102] | [753..822] |
|
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636.0 | [0..24] | [645..637] |
|
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628.0 | [0..3] | [752..1679] |
|
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625.0 | [0..155] | [746..1028] |
|
Region A: Residues: [1-411] |
1 11 21 31 41 51
| | | | | |
1 MHRVGSAGSN GGSVRTRKEK KLTYVLNDAN DTKHCAGINC LDVLKSSVSN DQSYLFTGSR 60
61 DGTLKRWAFD EDATFCSATF ESHVDWVNDA ALAGESTLVS CSSDTTVKTW DGLSDGVCTR 120
121 TLRQHSDYVT CLAVAAKNNN VVASGGLGGE VFIWDIEAAL SPVTKPNDAN EDSSSNGANG 180
181 PVTSLRTVGS SNNISVQSSP SHGYTPTIAK GHKESVYALA MNDTGTMLVS GGTEKVLRVW 240
241 DPRTGSKSMK LRGHTDNVRV LLLDSTGRFC LSGSSDSMIR LWDLGQQRCL HTYAVHTDSV 300
301 WALACNPSFS HVYSGGRDQC LYLTDLATRE SVLLCTKEHP IQQLALQDNS IWVATTDSSV 360
361 ERWPAEVQSP KTVFQRGGSF LAGNLSFNRA RVSLEGLNPA PAYKEPSITV P
|
| Detection Method: |  |
| Confidence: | 67.69897 |
| Match: | 2ovpB |
| Description: | No description for 2ovpB was found. |
|
Region A: Residues: [412-553] |
1 11 21 31 41 51
| | | | | |
1 GTHPIVQHEI LNNKRQILTK DAAGSVKLWD ITRGVVVEDY GKISFEEKKE ELFEMVSIPS 60
61 WFTVDTRLGC LSVHLETPQC FSAEMYSADL KVSGRPEDDK INLARETLKG LLGHWLAKKK 120
121 HKPKPQVLAS GDTLSVKDTK KN
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1l0qA |
| Description: | Surface layer protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [554-602] |
1 11 21 31 41 51
| | | | | |
1 LSASKTEESS AASDPVYPPF EFSSVSPPSI ITEGSQGGPW RKKITEFTG
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.312 | a.4.1 | Homeodomain-like |
| View | Download | 0.310 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.310 | a.60.1 | SAM/Pointed domain |
| View | Download | 0.288 | a.4.1 | Homeodomain-like |
| View | Download | 0.281 | a.4.1 | Homeodomain-like |
| View | Download | 0.268 | a.5.2 | UBA-like |
| View | Download | 0.267 | a.4.1 | Homeodomain-like |
| View | Download | 0.217 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.213 | a.60.1 | SAM/Pointed domain |
|
Region A: Residues: [603-753] |
1 11 21 31 41 51
| | | | | |
1 TEDEKDFPLW CLDAVLNNRL PPRENTKLSF FLHPCEGSSV QVVTLGKLSA PRILRVHKVT 60
61 NYVVEKMVLD NPLDSLAIDA ASVSGGQPQP LFSGNGLLQS GLKPWQKLRP SIEILCNSQV 120
121 LSPDMSLATV RAYVWKKPED LILNYRVAIA R
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| Detection Method: | |
| Confidence: | 0.97 |
| Match: | 1kotA |
| Description: | GABA(A) receptor associated protein GABARAP |
Matching Structure (courtesy of the PDB): |
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