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View Structure Prediction Details

Protein: TANB_ARATH
Organism: Arabidopsis thaliana
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TANB_ARATH.

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
230.0 [0..4] [443..711]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVARTPQKQR KVAMVVPPLN SDLLKETINK VDKCMERLQE LQYTIAGGTK VVSGVNLSPR  60
   61 STRIYLKTSL RCKQETLRIK NATNKKSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGKFPASSPG DWRKMSLPAM LLGETVNEIL QASQVTRDIV DAIAPKKSRK SRRLTMSQED  60
   61 DGPKTPETQQ KSREQNPETV SSNIKARRKK EKQNRRSESD SPPSLQRARS RIAFRTISPQ 120
  121 VKGNNGENSF RHLANRVSPK HKPWVKKAVL FPNPLFISGT ATQQAKFSRT MSPVIAR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [266-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEISSIKNNK ETPYKFLIKS PPTSASKFQV KIRSPPKVLV SPTRNGSNSV RKSPRGSRSP  60
   61 TRTVNLGKKS ASISPIRNTG KRSPKLSTAA KLRRSFTPTR NGSNLARKSS ISPKRVTLQA 120
  121 FLSPTRNGNF CKKSPKASIS PTRVCNKSQK LSTAAKFRRS FSPSRLAMRF VSPMKSRKV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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