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View Structure Prediction Details

Protein: TANB_ARATH
Organism: Arabidopsis thaliana
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TANB_ARATH.

Description E-value Query
Range
Subject
Range
gi|70878103 - gi|70878103|gb|EAN91386.1| trans-sialidase, putative [Trypanosoma cruzi]
gi|71648919 - gi|71648919|ref|XP_813237.1| trans-sialidase [Trypanosoma cruzi strain CL Brener]
230.0 [0..4] [443..711]

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Predicted Domain #1
Region A:
Residues: [1-88]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVARTPQKQR KVAMVVPPLN SDLLKETINK VDKCMERLQE LQYTIAGGTK VVSGVNLSPR  60
   61 STRIYLKTSL RCKQETLRIK NATNKKSP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [89-265]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGKFPASSPG DWRKMSLPAM LLGETVNEIL QASQVTRDIV DAIAPKKSRK SRRLTMSQED  60
   61 DGPKTPETQQ KSREQNPETV SSNIKARRKK EKQNRRSESD SPPSLQRARS RIAFRTISPQ 120
  121 VKGNNGENSF RHLANRVSPK HKPWVKKAVL FPNPLFISGT ATQQAKFSRT MSPVIAR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [266-444]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NEISSIKNNK ETPYKFLIKS PPTSASKFQV KIRSPPKVLV SPTRNGSNSV RKSPRGSRSP  60
   61 TRTVNLGKKS ASISPIRNTG KRSPKLSTAA KLRRSFTPTR NGSNLARKSS ISPKRVTLQA 120
  121 FLSPTRNGNF CKKSPKASIS PTRVCNKSQK LSTAAKFRRS FSPSRLAMRF VSPMKSRKV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle