| Protein: | PIF1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 478 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PIF1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
256.0 | [0..1] | [477..1] |
|
Region A: Residues: [1-240] |
1 11 21 31 41 51
| | | | | |
1 MHHFVPDFDT DDDYVNNHNS SLNHLPRKSI TTMGEDDDLM ELLWQNGQVV VQNQRLHTKK 60
61 PSSSPPKLLP SMDPQQQPSS DQNLFIQEDE MTSWLHYPLR DDDFCSDLLF SAAPTATATA 120
121 TVSQVTAARP PVSSTNESRP PVRNFMNFSR LRGDFNNGRG GESGPLLSKA VVRESTQVSP 180
181 SATPSAAASE SGLTRRTDGT DSSAVAGGGA YNRKGKAVAM TAPAIEITGT SSSVVSKSEI 240
241
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [241-364] |
1 11 21 31 41 51
| | | | | |
1 EPEKTNVDDR KRKEREATTT DETESRSEET KQARVSTTST KRSRAAEVHN LSERKRRDRI 60
61 NERMKALQEL IPRCNKSDKA SMLDEAIEYM KSLQLQIQMM SMGCGMMPMM YPGMQQYMPH 120
121 MAMG
|
| Detection Method: | |
| Confidence: | 13.39794 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.12507195426228 | bayes_pls_golite062009 |
| nucleic acid binding | 0.43204604575196 | bayes_pls_golite062009 |
| DNA binding | 0.40884226851256 | bayes_pls_golite062009 |
| transcription regulator activity | 0.31759335140578 | bayes_pls_golite062009 |
| transcription factor activity | 0.09721565916723 | bayes_pls_golite062009 |
|
Region A: Residues: [365-478] |
1 11 21 31 41 51
| | | | | |
1 MGMNQPIPPP SFMPFPNMLA AQRPLPTQTH MAGSGPQYPV HASDPSRVFV PNQQYDPTSG 60
61 QPQYPAGYTD PYQQFRGLHP TQPPQFQNQA TSYPSSSRVS SSKESEDHGN HTTG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
