| Protein: | CLPR4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 305 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CLPR4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
293.0 | [0..1] | [305..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MEVAAATATS FTTLRARTSA IIPSSTRNLR SKPRFSSSSS LRASLSNGFL SPYTGGSISS 60
61 DLCGAKLRAE SLNPLNFSSS KPKRG
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.529 | a.3.1 | Cytochrome c |
| View | Download | 0.504 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.496 | a.64.1 | Saposin |
| View | Download | 0.461 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.443 | a.21.1 | HMG-box |
|
Region A: Residues: [86-305] |
1 11 21 31 41 51
| | | | | |
1 VVTMVIPFSK GSAHEQPPPD LASYLFKNRI VYLGMSLVPS VTELILAEFL YLQYEDEEKP 60
61 IYLYINSTGT TKNGEKLGYD TEAFAIYDVM GYVKPPIFTL CVGNAWGEAA LLLTAGAKGN 120
121 RSALPSSTIM IKQPIARFQG QATDVEIARK EIKHIKTEMV KLYSKHIGKS PEQIEADMKR 180
181 PKYFSPTEAV EYGIIDKVVY NERGSQDRGV VSDLKKAQLI
|
| Detection Method: | |
| Confidence: | 73.39794 |
| Match: | 1tyfA |
| Description: | Clp protease, ClpP subunit |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.46154163027498 | bayes_pls_golite062009 |
| enoyl-CoA hydratase activity | 1.27969156772229 | bayes_pls_golite062009 |
| CoA carboxylase activity | 0.939626895227199 | bayes_pls_golite062009 |
| acetyl-CoA carboxylase activity | 0.764444938444292 | bayes_pls_golite062009 |
| ligase activity, forming carbon-carbon bonds | 0.621229080200493 | bayes_pls_golite062009 |
| binding | 0.578223105269736 | bayes_pls_golite062009 |
| hydrolase activity | 0.534319520590169 | bayes_pls_golite062009 |
| ligase activity | 0.32092496884003 | bayes_pls_golite062009 |
