| Protein: | gi|18408863, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 433 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18408863, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
488.0 | [0..1] | [433..21] |
|
Region A: Residues: [1-60] |
1 11 21 31 41 51
| | | | | |
1 MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP 60
61
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [61-275] |
1 11 21 31 41 51
| | | | | |
1 KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV TKSNEWTGAR SFGRKSLHFI 60
61 GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM 120
121 CYREIVPQLR LSGPTSFAPI IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ 180
181 EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFD
|
| Detection Method: | |
| Confidence: | 2.26 |
| Match: | 1q0pA |
| Description: | A domain of Factor B |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [276-433] |
1 11 21 31 41 51
| | | | | |
1 DNIPARAFDN FQFVNFTDIM SKNIDPARKE AEFALSALME IPSQYKATLE LGLLGQRTGH 60
61 CPDRIALPPP TYATQSMRNS PRTSRSTSFQ NKPYDNGVSS TPPSTTHNES QQQFCPVCLV 120
121 SAKNMAFNCG HQTCAGCGED LHVCPICRSS ISVRIKLY
|
| Detection Method: | |
| Confidence: | 11.69897 |
| Match: | 1fbvA |
| Description: | Cbl; N-terminal domain of cbl (N-cbl); CBL |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.434026084000615 | bayes_pls_golite062009 |
| protein binding | 0.31534665043077 | bayes_pls_golite062009 |
