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Protein Overview: gi|18408863, gi|...

General Information:
Name(s) found: gi|42572019 [NCBI NR]
gi|21592955 [NCBI NR]
gi|18408863 [NCBI NR]
gi|145326680 [NCBI NR]
gi|119935848 [NCBI NR]
Description(s) found:
Found 14 descriptions.
SHOW ALL
  • gi|42572019|ref|NP_974100.1| copine-related [Arabidopsis thaliana] [NCBI NR]
  • gi|21592955|gb|AAM64905.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18408863|ref|NP_564907.1| copine-related [Arabidopsis thaliana] [NCBI NR]
  • gi|145326680|ref|NP_001077787.1| copine-related [Arabidopsis thaliana] [NCBI NR]
  • gi|119935848|gb|ABM06011.1| At1g67800 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 433 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ TPNHPSASPV SSYNSGRQTP  60
   61 KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV TKSNEWTGAR SFGRKSLHFI 120
  121 GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ DVFSFNPNDT YCNGFEEVLM 180
  181 CYREIVPQLR LSGPTSFAPI IERAMTIVEE SGGQYHVLLI IADGQVTRSV DTDNGGFSPQ 240
  241 EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA RAFDNFQFVN FTDIMSKNID 300
  301 PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI ALPPPTYATQ SMRNSPRTSR 360
  361 STSFQNKPYD NGVSSTPPST THNESQQQFC PVCLVSAKNM AFNCGHQTCA GCGEDLHVCP 420
  421 ICRSSISVRI KLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..60] MSA 2.080994 View MSA. No confident structure predictions are available.
    2 View Details [61..275] FFAS03 2.26 A domain of Factor B
    3 View Details [276..433] PSI-BLAST 11.69897 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.434026084000615 bayes_pls_golite062009
  • protein binding
    		•  0.31534665043077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle