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Protein Overview: gi|30697566

General Information:
Name(s) found: gi|30697566 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|30697566|ref|NP_849857.1| copine-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 453 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEVLQAIVL FILFWVWLSW MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ  60
   61 TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV 120
  121 TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ 180
  181 DVFSFNPNDT YCNGFEEVLM CYREIVPQLR LSGPTSFAPI IERAMTIVEE SGGQYHVLLI 240
  241 IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA 300
  301 RAFDNFQFVN FTDIMSKNID PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI 360
  361 ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST THNESQQQFC PVCLVSAKNM 420
  421 AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] MSA 5.083992 View MSA. No confident structure predictions are available.
    2 View Details [81..318] FFAS03 2.77 A domain of Factor B
    3 View Details [319..453] PSI-BLAST 12.0 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.434026084000615 bayes_pls_golite062009
  • protein binding
    		•  0.31534665043077 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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