YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30697566
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEVLQAIVL FILFWVWLSW MGGSSSKESP RGGGSGRRYE RSVSGSSSYS SAWDQSSYYQ  60
   61 TPNHPSASPV SSYNSGRQTP KNLERKYSRI ADNYRSIDEV TAALSHAGLE SSNLIVGIDV 120
  121 TKSNEWTGAR SFGRKSLHFI GTTPNPYQQA ISIIGKTLSV FDEDNLIPCY GFGDATTHDQ 180
  181 DVFSFNPNDT YCNGFEEVLM CYREIVPQLR LSGPTSFAPI IERAMTIVEE SGGQYHVLLI 240
  241 IADGQVTRSV DTDNGGFSPQ EQQTIDAIVR ASEYPLSIVL VGVGDGPWDT MRQFDDNIPA 300
  301 RAFDNFQFVN FTDIMSKNID PARKEAEFAL SALMEIPSQY KATLELGLLG QRTGHCPDRI 360
  361 ALPPPTYATQ SMRNSPRTSR STSFQNKPYD NGVSSTPPST THNESQQQFC PVCLVSAKNM 420
  421 AFNCGHQTCA GCGEDLHVCP ICRSSISVRI KLY

Type	Start	End	Confidence
Signal Peptide	1	26	0.89
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	453	0.99