| Protein: | gi|17979390, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 671 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|17979390, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
454.0 | [0..16] | [670..75] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MAALTRNKKK GSNSQTPPLN KQTKASPLKK AAKTQKPPLK KQRKCISEKK PLKKPEVSTD 60
61 EEEEEEENEQ SDEGSESGSD LFSDGDEEGN NDSDDDDDDD DD
|
| Detection Method: |  |
| Confidence: | 0.954 |
| Match: | 1jj2G |
| Description: | Ribosomal protein L10 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [103-237] |
1 11 21 31 41 51
| | | | | |
1 DDDDDEDAEP LAEDFLDGSD NEEVTMGSDL DSDSGGSKLE RKSRAIDRKR KKEVQDADDE 60
61 FKMNIKEKPD EFQLPTQKEL EEEARRPPDL PSLQMRIREI VRILSNFKDL KPKGDKHERN 120
121 DYVGQLKADL SSYYG
|
| Detection Method: | |
| Confidence: | 5.30103 |
| Match: | 1eyvA |
| Description: | Antitermination factor NusB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 0.271556861799499 | bayes_pls_golite062009 |
|
Region A: Residues: [238-548] |
1 11 21 31 41 51
| | | | | |
1 YNEFLIGTLI EMFPVVELME LIEAFEKKRP TSIRTNTLKT RRRDLADILL NRGVNLDPLS 60
61 KWSKVGLIVY DSQVPIGATP EYLAGFYMLQ SASSFLPVMA LAPREKERVV DMAAAPGGKT 120
121 TYVAALMKNT GIIYANEMKV PRLKSLSANL HRMGVTNTIV CNYDGRELTK VLGQSSVDRV 180
181 LLDAPCSGTG VISKDESVKT SKSADDIKKF AHLQKQLILG AIDLVDANSK TGGYIVYSTC 240
241 SVMIPENEAV IDYALKNRDV KLVPCGLDFG RPGFSSFREH RFHPSLEKTR RFYPHVHNMD 300
301 GFFVAKLKKM S
|
| Detection Method: | |
| Confidence: | 81.0 |
| Match: | 1ixkA |
| Description: | Crystal Structure Analysis of Methyltransferase Homolog Protein from Pyrococcus Horikoshii |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 0.857347609112816 | bayes_pls_golite062009 |
| transferase activity | 0.769739415230943 | bayes_pls_golite062009 |
| transferase activity, transferring one-carbon groups | 0.648175251543522 | bayes_pls_golite062009 |
| methyltransferase activity | 0.646052703874729 | bayes_pls_golite062009 |
| S-adenosylmethionine-dependent methyltransferase activity | 0.00827854656426392 | bayes_pls_golite062009 |
|
Region A: Residues: [549-671] |
1 11 21 31 41 51
| | | | | |
1 NAMQPSGNDE PAVTMEQAQV SSSDDDDEKA EAIEELEKPP VASGQPKRES NTKEDTNKRK 60
61 NPRSKEIHKG KRNKNTKTES GNVEEPRKQK KKRSQWKNEI AQAREEKRKT MRENAKETPK 120
121 HRG
|
| Detection Method: | |
| Confidence: | 1.5 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
