| Protein: | gi|30678068, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 422 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30678068, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
258.0 | [0..1] | [422..1] |
|
Region A: Residues: [1-145] |
1 11 21 31 41 51
| | | | | |
1 MTPESNAPSV DPQFVGNGFV QEYYNHLYDS TSEVHKFYLE DSMISRPGLD GEIVTIKSLK 60
61 GINDQIMSID YKSSRIEILT ADSQSTLKNG VVTLVTGLVI GNDGGRRKFS QSFFLVSRNG 120
121 SYFVLNDTFR YVSDEFVEPE ATKEV
|
| Detection Method: |  |
| Confidence: | 36.221849 |
| Match: | 1a2kA |
| Description: | Nuclear transport factor-2 (NTF2) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein binding | 1.74084472095013 | bayes_pls_golite062009 |
| binding | 1.29138202593822 | bayes_pls_golite062009 |
| phosphotransferase activity, alcohol group as acceptor | 0.983337869604082 | bayes_pls_golite062009 |
| kinase activity | 0.871357091497469 | bayes_pls_golite062009 |
| protein serine/threonine kinase activity | 0.797931524291551 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.662760637049546 | bayes_pls_golite062009 |
| protein kinase activity | 0.622060011038738 | bayes_pls_golite062009 |
| transporter activity | 0.55283159394909 | bayes_pls_golite062009 |
| protein transporter activity | 0.300724614509129 | bayes_pls_golite062009 |
| transferase activity | 0.250005906709975 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0725168535072961 | bayes_pls_golite062009 |
|
Region A: Residues: [146-422] |
1 11 21 31 41 51
| | | | | |
1 EESQSTNAIT EPANESVEAV IVPTEAKTTV TKPASAIPNG HAKVPEEKVV NENSSLPKAA 60
61 EAKLQEEVPK KSFALIVQSL AQSAGTLQVK ASPVKRKPVE KPVAAPERKA PSPIRKQASA 120
121 ESIKPQAQGS SIFVANLPMD ATIEQLYETF KSFGAIRKDG IQVRSYPEKK NCIGFVAFEN 180
181 GEAVKNVFQA HRESPIRIGN RRASIEEKRG GNNQNGNRVS TRNNSGYKNE DGFRRDGYKP 240
241 RGSGVNGGRG YGRRNSESNG DGKAYQNNGH GNTEAKN
|
| Detection Method: | |
| Confidence: | 18.09691 |
| Match: | 1cvjA |
| Description: | Poly(A)-binding protein |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleic acid binding | 2.43517729895315 | bayes_pls_golite062009 |
| binding | 2.41127885655304 | bayes_pls_golite062009 |
| RNA binding | 1.96321378335448 | bayes_pls_golite062009 |
| protein binding | 1.52056358240529 | bayes_pls_golite062009 |
| mRNA binding | 0.79383576791259 | bayes_pls_golite062009 |
| small conjugating protein ligase activity | 0.681978520687901 | bayes_pls_golite062009 |
| ubiquitin-protein ligase activity | 0.494091580976874 | bayes_pls_golite062009 |
| acid-amino acid ligase activity | 0.257073928625242 | bayes_pls_golite062009 |
