| Protein: | ORP1C_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 814 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORP1C_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
809.0 | [0..1] | [814..1] |
|
Region A: Residues: [1-101] |
1 11 21 31 41 51
| | | | | |
1 MHPFCCVTTV SDHSPSMPPL PEPQPPLPNY AADFGSARSE PIITRSASQS YNHSGQFNNN 60
61 LIHSLSFNHH QSDVTDRLGQ RVLALPAAVR EPPVDVKIND I
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [102-283] |
1 11 21 31 41 51
| | | | | |
1 VGNGIAGILY KWVNYGRGWR PRWFVLQDGV LSYYKIHGPD KIFVSPETEK GSKVIGDESA 60
61 RMISRHNRRG GSSSSCQLRR KPFGEVHLKV SSVRESRSDD KRFSIFTGTK RLHLRAETRE 120
121 DRTTWVEALQ AVKDMFPRMS NSELMAPTNN LAMSTEKIRL RLIEEGVSEL AIQDCEQIMK 180
181 SE
|
| Detection Method: | |
| Confidence: | 13.522879 |
| Match: | 1u5fA |
| Description: | Crystal Structure of the PH Domain of SKAP-Hom with 8 Vector-derived N-terminal Residues |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [284-428] |
1 11 21 31 41 51
| | | | | |
1 FSALQSQLVL LKQKQWLLID TLRQLETEKV DLENTVVDES QRQADNGCSG ELRHEKFSEG 60
61 TATESDDDNE RGDAAEEEFD EEENTFFDTR DFLSSSSFKS SGSGFRTSSF SSDEDGFESE 120
121 DDIDPSIKSI GCNYPRVKRR KNLPD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [429-814] |
1 11 21 31 41 51
| | | | | |
1 PVEKEKSVSL WSMIKDNIGK DLTKVCLPVY FNEPLSSLQK CFEDLEYSYL LDRAFEYGKR 60
61 GNSLMRILNV AAFAVSGYAS TEGRICKPFN PLLGETYEAD YPDKGLRFFS EKVSHHPMVV 120
121 ACHCDGTGWK FWGDSNLRSK FWGRSIQLDP VGVLTLQFDD GEILQWSKVT TSIYNLILGK 180
181 LYCDHYGTMR IEGSAEYSCK LKFKEQSIID RNPHQVHGIV QNKSGKTVAT MFGKWDESIH 240
241 FVTGDCSGKG KLSEDMSGAQ LLWKRSKPPG NATKYNLTRF AITLNELTPG LKERLPPTDS 300
301 RLRPDQRYLE NGEFEMANTE KLRLEQRQRQ ARKMQERGWK PRWFMKEKGS ESYRYKGGYW 360
361 EAREDGSWVD CPDIFGHIDS DQQMIE
|
| Detection Method: | |
| Confidence: | 70.522879 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| binding | 1.67154210149282 | bayes_pls_golite062009 |
| lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
| oxysterol binding | 1.1738554488982 | bayes_pls_golite062009 |
| phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |
