| Protein: | gi|225933584, gi... |
| Organism: | Burkholderia pseudomallei Pakistan 9 |
| Length: | 291 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|225933584, gi....
| Description | E-value | Query Range |
Subject Range |
|
|
331.0 | [0..1] | [291..1] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MSAADEASAR AQPEDAIAAP AGADSTPDTV DGVAAFARLY GEPLFKLPQD LYIPPDALEV 60
61 FLETFEGPLD LLLYLIRKQN FNVLDIPMAE VTAQYLGYVD QIRESNLELA AEYLLMAAML 120
121 IEIKSRMLLP VKKADTGEDA EDPRAELVRR LLEYEQMKLA AQRLDQLPQL GRDFLRAEVY 180
181 IEQSITPRFP DVNADDLRAA WADVLKRAK
|
| Detection Method: |  |
| Confidence: | 5.275724 |
| Match: | PF02616.5 |
| Description: | No description for PF02616.5 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [210-291] |
1 11 21 31 41 51
| | | | | |
1 LVQHHKISRE ELSVREHMSL ILRKLQNARF MEFADLFDTT RGVPVVVVNF IAMLELARES 60
61 LVEITQAEPF APIYVRLAYL PA
|
| Detection Method: | |
| Confidence: | 1.49 |
| Match: | 1w1wE |
| Description: | Sc Smc1hd:Scc1-C complex, ATPgS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.88909660213693 | bayes_pls_golite062009 |
| transcription regulator activity | 0.659146952966611 | bayes_pls_golite062009 |
| nucleic acid binding | 0.526614151800537 | bayes_pls_golite062009 |
| DNA binding | 0.443743931209129 | bayes_pls_golite062009 |
| protein binding | 0.215355480170793 | bayes_pls_golite062009 |
| sequence-specific DNA binding | 0.0198908199689938 | bayes_pls_golite062009 |
