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View Structure Prediction Details

Protein: gi|37526053, gi|...
Organism: Photorhabdus luminescens subsp. laumondii TTO1
Length: 270 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|37526053, gi|....

Description E-value Query
Range
Subject
Range
gi|90438964, gi|... - gi|90580079|ref|ZP_01235887.1| putative septum site-determining protein MinD [Vibrio angustum S14], ...
235.0 [0..1] [270..1]

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Predicted Domain #1
Region A:
Residues: [1-270]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARIIVVTSG KGGVGKTTSS AAIATGLAQR GKKTVVIDFD IGLRNLDLIM GCERRVVYDF  60
   61 VNVIQGDVSL NQALIKDKRT ENLYILPASQ TRDKDALTSE GVEKVLVDLD KQGFDFIICD 120
  121 SPAGIESGAL IALYFADEAI ITTNPEVSSV RDSDRILGIL ASKSRRAERG EDPIKEHLLL 180
  181 TRYNPGRVSR GDMLSMEDVL EILCIPLIGV IPEDQSVLRS SNQGEPVILD TESDAGKAYT 240
  241 DTVERLLGEE RPFRFIEEEK KGFLKRLFGG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.154902
Match: 1g3qA
Description: Cell division regulator MinD
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleoside-triphosphatase activity 2.50267116518023 bayes_pls_golite062009
pyrophosphatase activity 2.42957469111629 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 2.40943522107938 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 2.40733363368781 bayes_pls_golite062009
binding 1.8576045268999 bayes_pls_golite062009
hydrolase activity 1.10968068468793 bayes_pls_golite062009
catalytic activity 0.458437698837681 bayes_pls_golite062009
protein binding 0.378225828131122 bayes_pls_golite062009
nucleotide binding 0.0601614967638421 bayes_pls_golite062009
purine nucleotide binding 0.0518926528648858 bayes_pls_golite062009
purine ribonucleotide binding 0.0231586743339878 bayes_pls_golite062009
ribonucleotide binding 0.0231035204040646 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle