| Protein: | gi|36784361, gi|... |
| Organism: | Photorhabdus luminescens subsp. laumondii TTO1 |
| Length: | 248 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|36784361, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
257.0 | [0..1] | [248..1] |
|
Region A: Residues: [1-248] |
1 11 21 31 41 51
| | | | | |
1 MSTAITRQVV LDTETTGMNK LGVHYEGHKI IEIGAVEVIN RRLTGRHFHV YIQPDRLVDP 60
61 EAFEVHGISD EFLQDKPLFA DIADEFIEFI RGAELIIHNA PFDIGFIDYE FGKLNRDIPP 120
121 TADFCKITDS LQLARGLFPG KRNNLDALCD RYDIDNSKRT LHGALLDAEI LSDVYLIMTG 180
181 GQTSLAFSME GEIASGANVS EIQRITRPQM ALKVIYATDE ELAAHESRLD LVEKKGGSCL 240
241 WRMNLGQS
|
| Detection Method: |  |
| Confidence: | 47.69897 |
| Match: | 1j53A |
| Description: | N-terminal exonuclease domain of the epsilon subunit of DNA polymerase III |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA polymerase activity | 7.87431862983329 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 7.78411937387917 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 5.3880945520411 | bayes_pls_golite062009 |
| exonuclease activity | 2.86892175148145 | bayes_pls_golite062009 |
| nuclease activity | 2.84202779131927 | bayes_pls_golite062009 |
| exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | 1.94077739152313 | bayes_pls_golite062009 |
| deoxyribonuclease activity | 1.87431870698721 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 1.87430802282815 | bayes_pls_golite062009 |
| hydrolase activity, acting on ester bonds | 1.75713164321634 | bayes_pls_golite062009 |
| transferase activity | 1.47288345517763 | bayes_pls_golite062009 |
| ribonuclease activity | 1.41871623152578 | bayes_pls_golite062009 |
| catalytic activity | 1.25233849524628 | bayes_pls_golite062009 |
| endonuclease activity | 0.935348031740788 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity, producing 5'-phosphomonoesters | 0.782108781904855 | bayes_pls_golite062009 |
| exodeoxyribonuclease activity | 0.77421125364834 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 0.64268174969672 | bayes_pls_golite062009 |
| endodeoxyribonuclease activity | 0.48776342704945 | bayes_pls_golite062009 |
| exoribonuclease activity | 0.26279899872348 | bayes_pls_golite062009 |
| nucleic acid binding | 0.251640316483416 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 0.18445559832317 | bayes_pls_golite062009 |
| single-stranded DNA specific 3'-5' exodeoxyribonuclease activity | 0.1355017328177 | bayes_pls_golite062009 |
| binding | 0.122249780594036 | bayes_pls_golite062009 |
