| Protein: | SYQ_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 795 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SYQ_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
794.0 | [0..1] | [795..1] |
|
Region A: Residues: [1-151] |
1 11 21 31 41 51
| | | | | |
1 MVLKDDNSEK SIELFISIGL DEKTARNTIN NNKVTANLTA VIHEAAVTDG CDRNTGNLLY 60
61 SVATKFPTNA LVHRPTLLKY IVNSKIKTPA QLEAAFAFFA STGPEDFKLN EFEEACGVGI 120
121 EVSPEDIEKA VKGIFEENKK TILEQRYRTN V
|
| Detection Method: |  |
| Confidence: | 63.481486 |
| Match: | PF04558.6 |
| Description: | No description for PF04558.6 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [152-252] |
1 11 21 31 41 51
| | | | | |
1 GELFGHVRKS LPWADPKIVK KLIDEKMYEL LGEKTAADNE KPTKKKEKKE KPAKVEEKKA 60
61 VVETTAEPSE EELNPYTIFP QPEQNFMVHT EVFFSDGSIL R
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1iq0A |
| Description: | Arginyl-tRNA synthetase (ArgRS); Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [253-795] |
1 11 21 31 41 51
| | | | | |
1 CSNTKEVLDK HLKVTGGKVY TRFPPEPNGY LHIGHAKAMF VDFGLAKERG GCCYLRYDDT 60
61 NPEAEKEEYI NHIEEIVKWM GWEPFKITYT SDYFQELYDL AVELIRRGHA YVDHQTADEI 120
121 KEYREKKMNS PWRDRPIEES LKLFDEMRRG IIEEGKATLR MKQDMQSDNF NMYDLIAYRI 180
181 KFAPHPKAGD KWCIYPSYDY AHCTVDSLEN ITHSLCTLEF ETRRASYYWL LHSLSLYMPY 240
241 VWEYSRLNVT NTVMSKRKLN YIVTNKYVDG WDDPRLLTLS GLRRRGVTST AINAFVRGIG 300
301 ITRSDGSMIH VSRLEHHIRE ELNKTAPRTM VVLNPLKVVI TNLESDKLIE LDAKRWPDAQ 360
361 NDDPSAFYKV PFSRVVYIDQ SDFRMKDSKD YYGLAPGKSV LLRYAFPIKC TNVVFADDNE 420
421 TVREIHAEYD PEKKSKPKGV LHWVAESSPG EEPIKVEVRL FEKLFNSENP AELNDAWLTD 480
481 INPNSKMVIS GAYAVSTLKD AAVGDRFQFE RLGYYAVDKD SEPGKLVFNR TVTLRDSYGK 540
541 GGK
|
| Detection Method: | |
| Confidence: | 165.0 |
| Match: | 1qrsA |
| Description: | Gln-tRNA synthetase (GlnRS), C-terminal (anticodon-binding) domain; Glutaminyl-tRNA synthetase (GlnRS) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| glutamine-tRNA ligase activity | 7.66556935228325 | bayes_pls_golite062009 |
| ligase activity, forming aminoacyl-tRNA and related compounds | 7.16276509815667 | bayes_pls_golite062009 |
| ligase activity, forming carbon-oxygen bonds | 7.16276509815667 | bayes_pls_golite062009 |
| aminoacyl-tRNA ligase activity | 7.13957775963187 | bayes_pls_golite062009 |
| ligase activity | 6.11211476973434 | bayes_pls_golite062009 |
| lysine-tRNA ligase activity | 4.64665624411373 | bayes_pls_golite062009 |
| structural constituent of ribosome | 4.61484562096458 | bayes_pls_golite062009 |
| structural molecule activity | 4.261982318682 | bayes_pls_golite062009 |
| glutamate-tRNA ligase activity | 2.63681738794687 | bayes_pls_golite062009 |
| catalytic activity | 2.37674226834122 | bayes_pls_golite062009 |
| 5S rRNA binding | 2.25646775578129 | bayes_pls_golite062009 |
| rRNA binding | 2.12571610259264 | bayes_pls_golite062009 |
| methionine-tRNA ligase activity | 2.01261843164558 | bayes_pls_golite062009 |
| tyrosine-tRNA ligase activity | 1.88984817882585 | bayes_pls_golite062009 |
| tryptophan-tRNA ligase activity | 1.14187887833901 | bayes_pls_golite062009 |
| arginine-tRNA ligase activity | 1.13743634264647 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 1.06535308346284 | bayes_pls_golite062009 |
| cysteine-tRNA ligase activity | 0.844943947059557 | bayes_pls_golite062009 |
| transferase activity, transferring phosphorus-containing groups | 0.625793556381714 | bayes_pls_golite062009 |
| binding | 0.47302762432927 | bayes_pls_golite062009 |
| nucleic acid binding | 0.161799496958314 | bayes_pls_golite062009 |
