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View Structure Prediction Details

Protein: gi|24899837, gi|...
Organism: Arabidopsis thaliana
Length: 355 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24899837, gi|....

Description E-value Query
Range
Subject
Range
gi|7267246, gi|2... - gi|7267246|emb|CAB80853.1| putative adenosine deaminase [Arabidopsis thaliana], pir||D85061 probable...
229.0 [0..1] [343..1]

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Predicted Domain #1
Region A:
Residues: [1-355]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEWIQSLPKI ELHAHLNGSI RDSTLLELAR VLGEKGVIVF ADVEHVIQKN DRSLVEVFKL  60
   61 FDLIHKLTTD HKTVTRITRE VVEDFALENV VYLELRTTPK RSDSIGMSKR SYMEAVIQGL 120
  121 RSVSEVDIDF VTASDSQKLH NAGDGIGRKK IYVRLLLSID RRETTESAME TVKLALEMRD 180
  181 VGVVGIDLSG NPLVGEWSTF LPALQYAKDN DLHITLHCGE VPNPKEIQAM LDFKPHRIGH 240
  241 ACFFKDEDWT KLKSFRIPVE ICLTSNIVTK SISSIDIHHF ADLYNAKHPL ILCTDDFGVF 300
  301 STSLSNEYAL AVRSLGLSKS ETFALARAAI DATFAEDEVK QQLRFIFDSA SPEHV

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Detection Method: PSI-BLAST
Confidence: 51.0
Match: 2bgnE
Description: HIV-1 Tat protein derived N-terminal nonapeptide Trp2-Tat(1-9) bound to the active site of Dipeptidyl peptidase IV (CD26)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
purine nucleoside binding 5.77008212157543 bayes_pls_golite062009
adenosine deaminase activity 4.58148305437166 bayes_pls_golite062009
hydrolase activity 3.62199995345412 bayes_pls_golite062009
dihydropyrimidinase activity 2.71615654592807 bayes_pls_golite062009
deaminase activity 1.79186203771221 bayes_pls_golite062009
catalytic activity 1.70199291046899 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.60895003474033 bayes_pls_golite062009
protein binding 0.928500526896831 bayes_pls_golite062009
guanine deaminase activity 0.861706835095856 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides 0.787370269329878 bayes_pls_golite062009
binding 0.778600467259354 bayes_pls_golite062009
adenine deaminase activity 0.703276443619277 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines 0.573107361273483 bayes_pls_golite062009
glycosaminoglycan binding 0.408989331337656 bayes_pls_golite062009
peptidase activity 0.356051335471361 bayes_pls_golite062009
dihydroorotase activity 0.203044795244555 bayes_pls_golite062009
nucleic acid binding 0.0469543675220554 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle