| Protein: | gi|18408151, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 515 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18408151, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
238.0 | [0..360] | [512..13] |
|
Region A: Residues: [1-344] |
1 11 21 31 41 51
| | | | | |
1 MSLRTRASSW PRLLLRRNPR SSFSRQISTL DSSTSTFPRR ISGYYSSSFF PVNQTPWISS 60
61 QRYRFFSSST MSPSEADRVV RELIAEVEKE KQREREERQR QGLDYKDIDA EDEEDYLGIE 120
121 PFIEKLKKQN LKDDGELNRR EESSDSDSEY DEIDLDEERK KEDIFNKKFQ RHKELLQTLT 180
181 KSETLDEAFR WMNKLDKFEE KHFKLRPEYR VIGELMNRLK VAEGKEKFVL QQKLNRAMRL 240
241 VEWKEAFDPN NPANYGVIER DNVQGGGEER EERLVADGPK DDNDDDDDEE EFDDMKERDD 300
301 ILLEKLNAID KKLEIKLSEL DHTFGKKGKR LEEEIRELAE DRNA
|
| Detection Method: |  |
| Confidence: | 17.09691 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [345-515] |
1 11 21 31 41 51
| | | | | |
1 LTEKKRQPLY RKGYDVHVID VKKVCKVTKG GRVERYTALM VCGNYEGIIG YAKAKAETGQ 60
61 SAMQKAYEKC FQNLHYVERH EEHTIAHAIQ TSYKKTKLYL WPAPTTTGMK AGRVVKTILL 120
121 LAGFKNIKSK VIGSRNSYNT VKAVLKALNA VETPKDVQEK FGRTVVEKYL L
|
| Detection Method: | |
| Confidence: | 57.221849 |
| Match: | 1vs5E |
| Description: | No description for 1vs5E was found. |
| Term | Confidence | Notes |
| structural constituent of ribosome | 6.7575603459566 | bayes_pls_golite062009 |
| structural molecule activity | 6.24187874355454 | bayes_pls_golite062009 |
| RNA binding | 3.5405508156591 | bayes_pls_golite062009 |
| nucleic acid binding | 2.98844454241303 | bayes_pls_golite062009 |
| binding | 2.86619976447436 | bayes_pls_golite062009 |
| 3'-5'-exoribonuclease activity | 1.56111033008721 | bayes_pls_golite062009 |
| DNA binding | 1.49492945560218 | bayes_pls_golite062009 |
| protein binding | 1.43319050998069 | bayes_pls_golite062009 |
| exoribonuclease activity, producing 5'-phosphomonoesters | 1.35935222635763 | bayes_pls_golite062009 |
| exoribonuclease activity | 1.31205157616894 | bayes_pls_golite062009 |
| transcription regulator activity | 1.22178500811874 | bayes_pls_golite062009 |
| 3'-5' exonuclease activity | 1.10842504252923 | bayes_pls_golite062009 |
| double-stranded RNA binding | 0.967560318725736 | bayes_pls_golite062009 |
| mRNA binding | 0.625703291171316 | bayes_pls_golite062009 |
| transcription factor activity | 0.31021399747574 | bayes_pls_golite062009 |
| RNA helicase activity | 0.222896865667011 | bayes_pls_golite062009 |
