| Protein: | gi|20259962, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 408 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20259962, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
284.0 | [0..1] | [388..202] |
|
|
252.0 | [0..1] | [408..207] |
|
|
237.0 | [0..12] | [403..216] |
|
|
226.0 | [0..14] | [403..218] |
|
|
226.0 | [0..12] | [387..198] |
|
|
224.0 | [0..12] | [387..198] |
|
Region A: Residues: [1-102] |
1 11 21 31 41 51
| | | | | |
1 MDRCEAGPDF EKNEFRKWFR SLLVERGGSF SDVFRSKHPE RKDAFTCWSS SSGAEQFNYG 60
61 SRIDHILVAG SCLHQDEDKQ GHSFLACHVK ECDILTEYKR FK
|
| Detection Method: |  |
| Confidence: | 32.154902 |
| Match: | 1akoA |
| Description: | EXONUCLEASE III FROM ESCHERICHIA COLI |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [103-174] |
1 11 21 31 41 51
| | | | | |
1 NENMPTRWKG GLVTKFKGSD HVPVFISFDD LPDIPEHSTP PLASRYLPMI YGFQQTLVSV 60
61 FKKRRANEEA KA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.593 | a.4.1 | Homeodomain-like |
| View | Download | 0.578 | a.230.1 | Description not found. |
| View | Download | 0.576 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.576 | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.559 | a.159.2 | FF domain |
| View | Download | 0.558 | a.159.2 | FF domain |
| View | Download | 0.525 | a.4.1 | Homeodomain-like |
| View | Download | 0.524 | b.36.1 | PDZ domain-like |
| View | Download | 0.418 | a.4.1 | Homeodomain-like |
| View | Download | 0.395 | a.159.4 | Description not found. |
| View | Download | 0.356 | a.159.4 | Description not found. |
| View | Download | 0.352 | a.159.4 | Description not found. |
| View | Download | 0.319 | a.4.1 | Homeodomain-like |
|
Region A: Residues: [175-337] |
1 11 21 31 41 51
| | | | | |
1 IEVSCSSSTQ SNTSSICGDI STGPLRNCGS MGISLEKSCS FENKSTSGVT EAETVAATGS 60
61 IDNLSDGIRA SSVRALNISR DGDRKKARKI QSSQLSLKSF FTTNSKVNNV EDSSSSYVSS 120
121 SPSSQVESIT EPNVSGKEDS EPTTSTQEQD QTGSSAKQKN DAA
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [338-408] |
1 11 21 31 41 51
| | | | | |
1 LMEWQRIQNL MQNSIPLCKG HKEACVARVV KKPGPTFGRR FYVCSRAEGP SSNPEANCGY 60
61 FKWASSKFRD K
|
| Detection Method: | |
| Confidence: | 8.443697 |
| Match: | PF06839.3 |
| Description: | No description for PF06839.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.428 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.403 | N/A | N/A | c.149.1 | Description not found. |
| View | Download | 0.376 | N/A | N/A | b.34.4 | Electron transport accessory proteins |
| View | Download | 0.337 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.282 | N/A | N/A | a.60.1 | SAM/Pointed domain |
| View | Download | 0.269 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.233 | N/A | N/A | a.77.1 | DEATH domain |
| View | Download | 0.212 | N/A | N/A | a.4.2 | Methylated DNA-protein cysteine methyltransferase, C-terminal domain |
