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Protein Overview: gi|215736944, gi...

General Information:
Name(s) found: gi|50726587 [NCBI NR]
gi|215736944 [NCBI NR]
gi|115480379 [NCBI NR]
gi|113632016 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|50726587|dbj|BAD34221.1| AP endonuclease 2-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215736944|dbj|BAG95873.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115480379|ref|NP_001063783.1| Os09g0536000 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113632016|dbj|BAF25697.1| Os09g0536000 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKIVTYNVN GLRPRVAQHG SLRRLLDALD ADIICFQETK LSRQDLSGDV IMAEGYEAFI  60
   61 SCNRSSKGRG AYSGVATFCR VTSAFSSQEV ALPVAAEEGF TGLQETAKNS ETIGDFVLVT 120
  121 PVEEEGLGEV TKEELLKVDN EGRCVITDHG HFVLFNIYGP AVEEDDIERV RFKLLFYKIL 180
  181 QRRWEHLLAL GKRVFVVGDL NIAPSSIDRC DAQPGFEKQT FRKWLRSMLR EHGGPFFDAF 240
  241 RSKHPERVGA YTCFNQKVGA EVYNYGSRID HILISGACFH HCGSVDDHSI FPCHVEECEI 300
  301 MDHFRRGNSE NMSMWKGGRS SKLEGSDHIP VYIVLNEIPE LPVHNTPSSA ARYLPEIRGR 360
  361 QQSIVSFLRK GMIYEHKDAM SMDRADESCC GGGLERKAIY KEEPPTDIAK FSKGNDLHSV 420
  421 IKRKIRDQLL NEGSSGNSHN STAALLATQS RKASFSCSKA VSNKKNKHNL SSQPTIKSFF 480
  481 QQPKSKPGDS STNSIVTPPD TLHGMDELHD PKNDCLPESI QCTTPATEDQ GNSDVPCSLS 540
  541 TDKCNEATLE WQRIQQRMKM TLPLCKGHHE PCIPRSVKKG SNIGRLFYVC ARAQGPASNQ 600
  601 EANCGHFQWA TVKSKEKRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..306] PSI-BLAST 82.0 DNA repair endonuclease Hap1
    2 View Details [307..389] deduced N/A No confident structure predictions are available.
    3 View Details [390..534] MSA 3.216997 View MSA. No confident structure predictions are available.
    4 View Details [535..619] Pfam 5.376751 No description for PF06839.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle